RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 PCYT1AP49585 367 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 CDH12P55289 794 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 MAT1AQ00266 395 aaKnown RBP9.59□□□□□ -0.87
SMG6-213ENST00000573166 GBX1Q14549 363 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 KCNAB1Q14722 419 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 REEP3Q6NUK4 255 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 CDC73Q6P1J9 531 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 AAGABQ6PD74 315 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 RBM44Q6ZP01 1051 aaKnown RBP9.59□□□□□ -0.87
SMG6-213ENST00000573166 DEPDC7Q96QD5 511 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 APOL4Q9BPW4 351 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 CCDC106Q9BWC9 280 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 TBC1D23Q9NUY8 699 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 FBXO4Q9UKT5 387 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 ASB1Q9Y576 335 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 PAPLNO95428 1278 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 PAICSP22234 425 aaKnown RBP9.59□□□□□ -0.87
SMG6-213ENST00000573166 ITGA3P26006 1051 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 PEX2P28328 305 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 PTGER1P34995 402 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 BTBD16Q32M84 506 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 METTL4Q8N3J2 472 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 OR10Q1Q8NGQ4 319 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 MS4A8Q9BY19 250 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 LRRN3Q9H3W5 708 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 SCHIP1Q9P0W5 487 aaPredicted RBP9.59□□□□□ -0.87
SMG6-213ENST00000573166 ZNF624Q9P2J8 865 aaPredicted RBP9.59□□□□□ -0.87
SMG6-213ENST00000573166 GTF2A1LQ9UNN4 478 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 PCNTO95613 3336 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 PATE3B3GLJ2 98 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 TARM1B6A8C7 271 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 ARPC2O15144 300 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 PRKD3O94806 890 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 IGHV4-34P06331 123 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 BMP1P13497 986 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 TACR1P25103 407 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 EPHA8P29322 1005 aaPredicted RBP9.58□□□□□ -0.88
SMG6-213ENST00000573166 GSTM5P46439 218 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 SLC6A12P48065 614 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 DCST1Q5T197 706 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 OR4K17Q8NGC6 315 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 NRG4Q8WWG1 115 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 KLHL6Q8WZ60 621 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 CHID1Q9BWS9 393 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 FAM86C1Q9NVL1 165 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 UCKL1Q9NWZ5 548 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 SIP14410 1827 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 ADAMDEC1O15204 470 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 PCDHGA12O60330 932 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 CELA2BP08218 269 aaPredicted RBP9.58□□□□□ -0.88
SMG6-213ENST00000573166 RORAP35398 523 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 NOVA1P51513 510 aaKnown RBP9.58□□□□□ -0.88
SMG6-213ENST00000573166 SLC5A12Q1EHB4 618 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 GAB4Q2WGN9 574 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 Q6ZSR9 355 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 NAGSQ8N159 534 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 OR5L2Q8NGL0 311 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 GPBAR1Q8TDU6 330 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 CIDECQ96AQ7 238 aaPredicted RBP9.58□□□□□ -0.88
SMG6-213ENST00000573166 SH3YL1Q96HL8 342 aaPredicted RBP9.58□□□□□ -0.88
SMG6-213ENST00000573166 NR1H4Q96RI1 486 aaPredicted RBP9.58□□□□□ -0.88
SMG6-213ENST00000573166 CIB1Q99828 191 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.58□□□□□ -0.88
SMG6-213ENST00000573166 ZBTB20Q9HC78 741 aaPredicted RBP9.58□□□□□ -0.88
SMG6-213ENST00000573166 MYNNQ9NPC7 610 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 TMPRSS11EQ9UL52 423 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 PCDHGA4Q9Y5G9 962 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 A0A1B0GVG6 124 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 A6NCN8 305 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 C17orf105B2RV13 164 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 MAN1A2O60476 641 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 GPR37L1O60883 481 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 KRT33AO76009 404 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 B3GALT4O96024 378 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 LYNP07948 512 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 CAPN3P20807 821 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 ACADLP28330 430 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 PLGLB1Q02325 96 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 PLCXD2Q0VAA5 305 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 FADDQ13158 208 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 FLYWCH1Q4VC44 716 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 KLHDC8BQ8IXV7 354 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 SETD9Q8NE22 299 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 OR2A1Q8NGT9 310 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 ASB9Q96DX5 294 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 SGPP1Q9BX95 441 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 SLC6A16Q9GZN6 736 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 NLGN3Q9NZ94 848 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 PDP1Q9P0J1 537 aaPredicted RBP9.58□□□□□ -0.88
SMG6-213ENST00000573166 TDRD6O60522 2096 aaKnown RBP9.58□□□□□ -0.88
SMG6-213ENST00000573166 CCDC163A0A0D9SF12 145 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 MCIDASD6RGH6 385 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 G3V2T6 193 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 EEDO75530 441 aaKnown RBP9.58□□□□□ -0.88
SMG6-213ENST00000573166 CREG1O75629 220 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 GALNT18Q6P9A2 607 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 RTL4Q6ZR62 310 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 SLC35F3Q8IY50 421 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 VWA5B2Q8N398 1253 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 PIK3C3Q8NEB9 887 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms