RNA–Protein interactions for RNA: ENST00000566910.1

CPNE2-208, Transcript of copine 2, human

TSL 5

Gene CPNE2, Length 938 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE2-208	ENST00000566910	TREX2	Q9BQ50	279 aa	Predicted RBP	12.51	□□□□□ -0.41
CPNE2-208	ENST00000566910	ERVK-6	Q9BXR3	956 aa		12.51	□□□□□ -0.41
CPNE2-208	ENST00000566910	EXO5	Q9H790	373 aa		12.51	□□□□□ -0.41
CPNE2-208	ENST00000566910	KCNJ16	Q9NPI9	418 aa		12.51	□□□□□ -0.41
CPNE2-208	ENST00000566910	DMRT3	Q9NQL9	472 aa		12.51	□□□□□ -0.41
CPNE2-208	ENST00000566910	ERVK-19	Q9WJR5	959 aa		12.51	□□□□□ -0.41
CPNE2-208	ENST00000566910	UTP11	Q9Y3A2	253 aa	Known RBP	12.51	□□□□□ -0.41
CPNE2-208	ENST00000566910	ANGPTL3	Q9Y5C1	460 aa		12.51	□□□□□ -0.41
CPNE2-208	ENST00000566910	HEATR5A	Q86XA9	2040 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	EED	O75530	441 aa	Known RBP	12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	NADK	O95544	446 aa	Predicted RBP	12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	IGHG3	P01860	377 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	RFPL3S	P0C7P2	107 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	IGFBP2	P18065	325 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	ACVR2A	P27037	513 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	MSX1	P28360	303 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	CRABP2	P29373	138 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	MAN2A2	P49641	1150 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	TNFRSF17	Q02223	184 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	ZNF267	Q14586	743 aa	Predicted RBP	12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	SLC10A1	Q14973	349 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	UAP1	Q16222	522 aa	Predicted RBP	12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	PFKFB4	Q16877	469 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	MPEG1	Q2M385	716 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	ZNF791	Q3KP31	576 aa	Predicted RBP	12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	SLC22A10	Q63ZE4	541 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	ADGRD1	Q6QNK2	874 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	LYPD8	Q6UX82	237 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	ZDHHC24	Q6UX98	284 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	RGS9BP	Q6ZS82	235 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	ACAD11	Q709F0	780 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	RBM18	Q96H35	190 aa	Known RBP	12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	SGCZ	Q96LD1	299 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	GAL3ST4	Q96RP7	486 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	TTYH2	Q9BSA4	534 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	CPSF2	Q9P2I0	782 aa	Known RBP	12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	ACAD8	Q9UKU7	415 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	ACOT9	Q9Y305	439 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	FAM215A	Q9Y5M1	114 aa		12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	12.5	□□□□□ -0.41
CPNE2-208	ENST00000566910	HRNR	Q86YZ3	2850 aa	Predicted RBP	12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910		A0A0G2JNJ9	132 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910		A0A1W2PS29	197 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	HMX2	A2RU54	273 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	BCKDK	O14874	412 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	PROM1	O43490	865 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	TMPRSS11D	O60235	418 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	SIX3	O95343	332 aa	Predicted RBP	12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	GBA	P04062	536 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	IGKV3-11	P04433	115 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	C2	P06681	752 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	GLI4	P10075	376 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	GFAP	P14136	432 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	ALOX15	P16050	662 aa	Predicted RBP	12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	CAPN3	P20807	821 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	ENDOU	P21128	410 aa	Known RBP	12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	CASQ1	P31415	396 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	STX2	P32856	288 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	NEK2	P51955	445 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	PLIN5	Q00G26	463 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	SLC7A5	Q01650	507 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	SNTB1	Q13884	538 aa	Known RBP	12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	SETDB1	Q15047	1291 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	CPSF6	Q16630	551 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	UBAP2	Q5T6F2	1119 aa	Known RBP	12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	TMEM64	Q6YI46	380 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	B3GNT6	Q6ZMB0	384 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	LIX1L	Q8IVB5	337 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	DMRTC2	Q8IXT2	367 aa	Predicted RBP	12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	FAM13C	Q8NE31	585 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	OR10G3	Q8NGC4	313 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	NUBPL	Q8TB37	319 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	SLC22A8	Q8TCC7	542 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	NRGN	Q92686	78 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	SPACA9	Q96E40	222 aa	Predicted RBP	12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	JSRP1	Q96MG2	331 aa	Predicted RBP	12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	ZNF717	Q9BY31	904 aa	Predicted RBP	12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	ACTR8	Q9H981	624 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	PROK2	Q9HC23	129 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	SPRR3	Q9UBC9	169 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910		Q9UFV3	132 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	PHF11	Q9UIL8	331 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	RNF11	Q9Y3C5	154 aa		12.49	□□□□□ -0.41
CPNE2-208	ENST00000566910	ITPR3	Q14573	2671 aa		12.48	□□□□□ -0.41
CPNE2-208	ENST00000566910	TRGV5	A0A0B4J1U4	118 aa		12.48	□□□□□ -0.41
CPNE2-208	ENST00000566910	IQANK1	A0A1B0GTG1	560 aa		12.48	□□□□□ -0.41
CPNE2-208	ENST00000566910		A0A1B0GVC2	190 aa		12.48	□□□□□ -0.41
CPNE2-208	ENST00000566910		A0A1W2PR48	441 aa		12.48	□□□□□ -0.41
CPNE2-208	ENST00000566910	ESYT3	A0FGR9	886 aa		12.48	□□□□□ -0.41
CPNE2-208	ENST00000566910	OR14I1	A6ND48	311 aa		12.48	□□□□□ -0.41
CPNE2-208	ENST00000566910	FIGNL2	A6NMB9	653 aa		12.48	□□□□□ -0.41
CPNE2-208	ENST00000566910	AQP7	O14520	342 aa		12.48	□□□□□ -0.41
CPNE2-208	ENST00000566910	OR10H2	O60403	315 aa		12.48	□□□□□ -0.41
CPNE2-208	ENST00000566910	SERPINB1	P30740	379 aa		12.48	□□□□□ -0.41
CPNE2-208	ENST00000566910	TLX1	P31314	330 aa	Predicted RBP	12.48	□□□□□ -0.41
CPNE2-208	ENST00000566910	BSG	P35613	385 aa		12.48	□□□□□ -0.41
CPNE2-208	ENST00000566910	ADH7	P40394	386 aa		12.48	□□□□□ -0.41
CPNE2-208	ENST00000566910	BUD31	P41223	144 aa	Predicted RBP	12.48	□□□□□ -0.41
CPNE2-208	ENST00000566910	PIK3CB	P42338	1070 aa		12.48	□□□□□ -0.41
CPNE2-208	ENST00000566910	ZFP36L2	P47974	494 aa	Known RBP	12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms