RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 IMPA1P29218 277 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 IL12AP29459 219 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 OXTRP30559 389 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 NUDT1P36639 197 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 RPL3P39023 403 aaKnown RBP4.25□□□□□ -1.73
SRP54-212ENST00000556992 DPP6P42658 865 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 ZFP36L2P47974 494 aaKnown RBP4.25□□□□□ -1.73
SRP54-212ENST00000556992 HSPA13P48723 471 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 GSK3BP49841 420 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 CCR8P51685 355 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 CLCNKAP51800 687 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 GTF2A1P52655 376 aaPredicted RBP4.25□□□□□ -1.73
SRP54-212ENST00000556992 DGKQP52824 942 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 YPEL5P62699 121 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 ABATP80404 500 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 CAPRIN1Q14444 709 aaKnown RBP4.25□□□□□ -1.73
SRP54-212ENST00000556992 NFE2L1Q14494 772 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 PON2Q15165 354 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 IRF4Q15306 451 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 TRIP10Q15642 601 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 PGS1Q32NB8 556 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 FAM174BQ3ZCQ3 159 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 CCSMST1Q4G0I0 132 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 SLC44A4Q53GD3 710 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 PYCR3Q53H96 274 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 SPIN4Q56A73 249 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 RUNDC3AQ59EK9 446 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 MTX3Q5HYI7 312 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 PAGE3Q5JUK9 113 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 CPTPQ5TA50 214 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 OGFRL1Q5TC84 451 aaPredicted RBP4.25□□□□□ -1.73
SRP54-212ENST00000556992 CAPRIN2Q6IMN6 1127 aaKnown RBP4.25□□□□□ -1.73
SRP54-212ENST00000556992 LCN8Q6JVE9 175 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 TLDC1Q6P9B6 456 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 SLC2A7Q6PXP3 512 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 LCTLQ6UWM7 567 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 TMIGD1Q6UXZ0 262 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 Q6ZNX1 250 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 FAM83HQ6ZRV2 1179 aaPredicted RBP4.25□□□□□ -1.73
SRP54-212ENST00000556992 MED25Q71SY5 747 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 FKBP9P1Q75LS8 142 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 CHST15Q7LFX5 561 aaPredicted RBP4.25□□□□□ -1.73
SRP54-212ENST00000556992 C17orf64Q86WR6 236 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 GLB1L2Q8IW92 636 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 RIMKLAQ8IXN7 391 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 LAS2Q8IYD9 372 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 SYNPOQ8N3V7 929 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 TBC1D19Q8N5T2 526 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 ICA1LQ8NDH6 482 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 DENND6BQ8NEG7 585 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 TRPV3Q8NET8 790 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 OR5K2Q8NHB8 316 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 HUS1BQ8NHY5 278 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 WDR20Q8TBZ3 569 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 SLC5A11Q8WWX8 675 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 FAM3CQ92520 227 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 GTF2H4Q92759 462 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 NEIL2Q969S2 332 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 CXorf40BQ96DE9 158 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 FCRL1Q96LA6 429 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 APOLD1Q96LR9 279 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 QRFPRQ96P65 431 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 GBP5Q96PP8 586 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 BTBD9Q96Q07 612 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 OR4K3Q96R72 315 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 NR1H4Q96RI1 486 aaPredicted RBP4.25□□□□□ -1.73
SRP54-212ENST00000556992 HBEGFQ99075 208 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 MTERF1Q99551 399 aaKnown RBP4.25□□□□□ -1.73
SRP54-212ENST00000556992 CGREF1Q99674 301 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 APOOQ9BUR5 198 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 RAB11FIP5Q9BXF6 653 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 BTBD1Q9H0C5 482 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 PCDHAC1Q9H158 963 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 TTYH1Q9H313 450 aaPredicted RBP4.25□□□□□ -1.73
SRP54-212ENST00000556992 Q9H521 79 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 ACTL8Q9H568 366 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 NT5DC2Q9H857 520 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 YY1AP1Q9H869 796 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 PELI2Q9HAT8 420 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 C8orf4Q9NR00 106 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 SEMA4GQ9NTN9 838 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 FOXJ2Q9P0K8 574 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 SPATA7Q9P0W8 599 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 SLC23A2Q9UGH3 650 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 SERGEFQ9UGK8 458 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 LRCH1Q9Y2L9 728 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 TDRKHQ9Y2W6 561 aaKnown RBP4.25□□□□□ -1.73
SRP54-212ENST00000556992 PRKAB1Q9Y478 270 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 POLR3HQ9Y535 204 aaPredicted RBP4.25□□□□□ -1.73
SRP54-212ENST00000556992 OR1A2Q9Y585 309 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 SNX13Q9Y5W8 968 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 HEBP2Q9Y5Z4 205 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 COLEC10Q9Y6Z7 277 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 TRANK1O15050 2925 aa4.25□□□□□ -1.73
SRP54-212ENST00000556992 MICAL3Q7RTP6 2002 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 TRIOO75962 3097 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 GNG14A0A1W2PPG7 69 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 DHRS12A0PJE2 317 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 ASPDHA6ND91 283 aa4.24□□□□□ -1.73
SRP54-212ENST00000556992 PRR23AA6NEV1 266 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms