RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CAMKVQ8NCB2 501 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 GOT1L1Q8NHS2 421 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-210ENST00000553693 FAM162AQ96A26 154 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 CCDC114Q96M63 670 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 MGME1Q9BQP7 344 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 ALKBH7Q9BT30 221 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-210ENST00000553693 NACAP1Q9BZK3 213 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 C10orf88Q9H8K7 445 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 CUTCQ9NTM9 273 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 THYN1Q9P016 225 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 DBF4Q9UBU7 674 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-210ENST00000553693 UBQLN2Q9UHD9 624 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 SPATA2Q9UM82 520 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 NSG2Q9Y328 171 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 MRPL11Q9Y3B7 192 aaKnown RBP2.91□□□□□ -1.94
SCFD1-210ENST00000553693 SNX5Q9Y5X3 404 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 POMT1Q9Y6A1 747 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 RGPD3A6NKT7 1758 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-210ENST00000553693 RGPD4Q7Z3J3 1758 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 PIK3C2GO75747 1445 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 SPATA31E1Q6ZUB1 1445 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 UMODL1Q5DID0 1318 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 PARP4Q9UKK3 1724 aaKnown RBP2.9□□□□□ -1.94
SCFD1-210ENST00000553693 PHRF1Q9P1Y6 1649 aaKnown RBP2.9□□□□□ -1.94
SCFD1-210ENST00000553693 ADCY9O60503 1353 aa2.9□□□□□ -1.94
SCFD1-210ENST00000553693 CPDO75976 1380 aa2.9□□□□□ -1.94
SCFD1-210ENST00000553693 ANKRD30BQ9BXX2 1392 aa2.9□□□□□ -1.94
SCFD1-210ENST00000553693 LMO7Q8WWI1 1683 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 LMO7DNF2Z398 122 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 NPIPA3F8WFD2 350 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 PGRMC2O15173 223 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 STX6O43752 255 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 TGDSO95455 350 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 IGHG1P01857 330 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 C9P02748 559 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 SUPT20HL2P0C7V6 817 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 BTG1P62324 171 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 UBXN1Q04323 297 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 CCDC184Q52MB2 194 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 ZNF542PQ5EBM4 170 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 VWA2Q5GFL6 755 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 NHLRC3Q5JS37 347 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.9□□□□□ -1.95
SCFD1-210ENST00000553693 MARC1Q5VT66 337 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 Q6ZVH6 145 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 TOM1L2Q6ZVM7 507 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 ERN2Q76MJ5 926 aaKnown RBP2.9□□□□□ -1.95
SCFD1-210ENST00000553693 SPATA21Q7Z572 469 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 ZC3H3Q8IXZ2 948 aaKnown RBP2.9□□□□□ -1.95
SCFD1-210ENST00000553693 CCDC170Q8IYT3 715 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 OR1B1Q8NGR6 318 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 GDAP1Q8TB36 358 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 CCDC47Q96A33 483 aaKnown RBP2.9□□□□□ -1.95
SCFD1-210ENST00000553693 AK8Q96MA6 479 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 ANKRD27Q96NW4 1050 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 ALKBH3Q96Q83 286 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-210ENST00000553693 TNFRSF13CQ96RJ3 184 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 PINK1Q9BXM7 581 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 MRPL9Q9BYD2 267 aaKnown RBP2.9□□□□□ -1.95
SCFD1-210ENST00000553693 YTHDF1Q9BYJ9 559 aaKnown RBP2.9□□□□□ -1.95
SCFD1-210ENST00000553693 SLC39A8Q9C0K1 460 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 DPEP2Q9H4A9 486 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 MGAT4AQ9UM21 535 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 RUVBL2Q9Y230 463 aaKnown RBP2.9□□□□□ -1.95
SCFD1-210ENST00000553693 ZFP37Q9Y6Q3 630 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-210ENST00000553693 BCL9O00512 1426 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 CRB1P82279 1406 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 ACEP12821 1306 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 LRRC37A3O60309 1634 aa2.9□□□□□ -1.95
SCFD1-210ENST00000553693 TULP4Q9NRJ4 1543 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 TRAV34A0A0B4J273 112 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 BICDL2A1A5D9 508 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 URADA6NGE7 173 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 FAM220BPB1ANY3 271 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 SPP1P10451 314 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 ZBTB25P24278 435 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 PTAFRP25105 342 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 SSTR1P30872 391 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 SPRP35270 261 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-210ENST00000553693 HLCSP50747 726 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 PPP5CP53041 499 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 PTK6Q13882 451 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 UGCGQ16739 394 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 LRRC37A5PQ49AS3 106 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 CAVIN1Q6NZI2 390 aaKnown RBP2.89□□□□□ -1.95
SCFD1-210ENST00000553693 C11orf57Q6ZUT1 292 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-210ENST00000553693 C5orf24Q7Z6I8 188 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 CROCCP3Q8IVE0 287 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 KLHL7Q8IXQ5 586 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 CARNMT1Q8N4J0 409 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 C10orf53Q8N6V4 93 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 LINC00167Q96N53 147 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 RUNDC3BQ96NL0 473 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 NAA11Q9BSU3 229 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-210ENST00000553693 TRIM7Q9C029 511 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 COPS7BQ9H9Q2 264 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-210ENST00000553693 WDR35Q9P2L0 1181 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 NCKAP1Q9Y2A7 1128 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 PAPPAQ13219 1627 aa2.89□□□□□ -1.95
SCFD1-210ENST00000553693 USP6P35125 1406 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms