RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 PRDX1Q06830 199 aaKnown RBP12.25□□□□□ -0.45
SHMT2-205ENST00000553474 ILKQ13418 452 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 ENPP2Q13822 863 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 DUSP7Q16829 419 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 PRSS53Q2L4Q9 553 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 WSCD2Q2TBF2 565 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 SPDYE7PQ495Y7 208 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 TMEM64Q6YI46 380 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 C6orf120Q7Z4R8 191 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 KRT73Q86Y46 540 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 MFSD4AQ8N468 514 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 TBC1D19Q8N5T2 526 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 HORMAD2Q8N7B1 307 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 AQP11Q8NBQ7 271 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 UTP15Q8TED0 518 aaKnown RBP12.25□□□□□ -0.45
SHMT2-205ENST00000553474 NR4A3Q92570 626 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 MOAP1Q96BY2 351 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 ITPKCQ96DU7 683 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 TMEM19Q96HH6 336 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 ZFYVE19Q96K21 471 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 NECTIN4Q96NY8 510 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 ACAT2Q9BWD1 397 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 RSPH9Q9H1X1 276 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-205ENST00000553474 DCSTAMPQ9H295 470 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 NMNAT1Q9HAN9 279 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-205ENST00000553474 PHPT1Q9NRX4 125 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-205ENST00000553474 CCDC59Q9P031 241 aaKnown RBP12.25□□□□□ -0.45
SHMT2-205ENST00000553474 PLAGL1Q9UM63 463 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 SPTBN5Q9NRC6 3674 aaKnown RBP12.25□□□□□ -0.45
SHMT2-205ENST00000553474 NINQ8N4C6 2090 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 IGLON5A6NGN9 336 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 MAN1A2O60476 641 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 SLITRK5O94991 958 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 RECKO95980 971 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 PCCBP05166 539 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 BCHEP06276 602 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 ADORA3P0DMS8 318 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 OSMP13725 252 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 PORP16435 677 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-205ENST00000553474 C21orf33P30042 268 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-205ENST00000553474 LIPAP38571 399 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 OPRD1P41143 372 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 CD97P48960 835 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 PPP5CP53041 499 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 CASP9P55211 416 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 NCS1P62166 190 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 ST3GAL4Q11206 333 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 PUM1Q14671 1186 aaKnown RBP eCLIP12.25□□□□□ -0.45
SHMT2-205ENST00000553474 INAQ16352 499 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 NDUFA9Q16795 377 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 ZNF404Q494X3 552 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 C1QTNF12Q5T7M4 302 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 AGBL4Q5VU57 503 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 PRAMEF8Q5VWM4 474 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 PRAMEF7Q5VXH5 474 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 MEDAGQ5VYS4 303 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 OR4C11Q6IEV9 310 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 KLHL17Q6TDP4 642 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 LACC1Q8IV20 430 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 SRFBP1Q8NEF9 429 aaKnown RBP12.25□□□□□ -0.45
SHMT2-205ENST00000553474 OR9Q2Q8NGE9 314 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 SFXN5Q8TD22 340 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 MYADMQ96S97 322 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 SARGQ9BW04 601 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 SLAMF7Q9NQ25 335 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 LHX9Q9NQ69 397 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 SIRT3Q9NTG7 399 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-205ENST00000553474 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.25□□□□□ -0.45
SHMT2-205ENST00000553474 A0A0A6YYD5 115 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 H7BY64 318 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 J3KTA2 159 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 M0R082 166 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 HMGN4O00479 90 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 SH3BP5O60239 455 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 CHMP24386 653 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 SLC19A1P41440 591 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 CCT3P49368 545 aaKnown RBP12.24□□□□□ -0.45
SHMT2-205ENST00000553474 CLCNKAP51800 687 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 CSNK1G2P78368 415 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 ALDH6A1Q02252 535 aaKnown RBP12.24□□□□□ -0.45
SHMT2-205ENST00000553474 COX10Q12887 443 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 RUNX3Q13761 415 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 CST6Q15828 149 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 TMEM201Q5SNT2 666 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 DCST1Q5T197 706 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 RNLSQ5VYX0 342 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 PTCRAQ6ISU1 281 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-205ENST00000553474 OR2L8Q8NGY9 312 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 MCFD2Q8NI22 146 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 PRAP1Q96NZ9 151 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 BTBD2Q9BX70 525 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 UCK2Q9BZX2 261 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 NXF2Q9GZY0 626 aaKnown RBP12.24□□□□□ -0.45
SHMT2-205ENST00000553474 DSN1Q9H410 356 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 MVB12BQ9H7P6 319 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 BCL2L10Q9HD36 194 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 FZD3Q9NPG1 666 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 CUEDC1Q9NWM3 386 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-205ENST00000553474 DAPK2Q9UIK4 370 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 UGT2A1Q9Y4X1 527 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms