RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 UCN3Q969E3 161 aa12.42□□□□□ -0.42
GCN1-206ENST00000549815 SGCZQ96LD1 299 aa12.42□□□□□ -0.42
GCN1-206ENST00000549815 TREX2Q9BQ50 279 aaPredicted RBP12.42□□□□□ -0.42
GCN1-206ENST00000549815 ENKD1Q9H0I2 346 aa12.42□□□□□ -0.42
GCN1-206ENST00000549815 VPS11Q9H270 941 aa12.42□□□□□ -0.42
GCN1-206ENST00000549815 IL1RL2Q9HB29 575 aa12.42□□□□□ -0.42
GCN1-206ENST00000549815 ZBTB26Q9HCK0 441 aa12.42□□□□□ -0.42
GCN1-206ENST00000549815 CPSF2Q9P2I0 782 aaKnown RBP12.42□□□□□ -0.42
GCN1-206ENST00000549815 COPS7AQ9UBW8 275 aa12.42□□□□□ -0.42
GCN1-206ENST00000549815 PHF11Q9UIL8 331 aa12.42□□□□□ -0.42
GCN1-206ENST00000549815 TNPO3Q9Y5L0 923 aaKnown RBP12.42□□□□□ -0.42
GCN1-206ENST00000549815 LIPGQ9Y5X9 500 aa12.42□□□□□ -0.42
GCN1-206ENST00000549815 PHF3Q92576 2039 aaKnown RBP12.42□□□□□ -0.42
GCN1-206ENST00000549815 A0A1W2PR48 441 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 FAM166BA8MTA8 275 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 G3V3Y1 287 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 FOXE1O00358 373 aaPredicted RBP12.41□□□□□ -0.42
GCN1-206ENST00000549815 IGHG3P01860 377 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 CLPSP04118 112 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 SNRPB2P08579 225 aaKnown RBP12.41□□□□□ -0.42
GCN1-206ENST00000549815 CCL3P10147 92 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 COX7A2P14406 83 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 PIK3CGP48736 1102 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 PLIN5Q00G26 463 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 ASPHQ12797 758 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 WHAMMP3Q1A5X7 153 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 NDUFAF5Q5TEU4 345 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 KLC3Q6P597 504 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 GK5Q6ZS86 529 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 GDF7Q7Z4P5 450 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 RPRMLQ8N4K4 120 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 TMEM251Q8N6I4 163 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 PTGR2Q8N8N7 351 aaPredicted RBP12.41□□□□□ -0.42
GCN1-206ENST00000549815 NOA1Q8NC60 698 aaKnown RBP12.41□□□□□ -0.42
GCN1-206ENST00000549815 OR52B6Q8NGF0 335 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 REPS1Q96D71 796 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 RBM18Q96H35 190 aaKnown RBP12.41□□□□□ -0.42
GCN1-206ENST00000549815 FBXL20Q96IG2 436 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 CDK15Q96Q40 435 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 FAM173AQ9BQD7 235 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 CENPKQ9BS16 269 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 NTMT1Q9BV86 223 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 TP63Q9H3D4 680 aaPredicted RBP12.41□□□□□ -0.42
GCN1-206ENST00000549815 NOL11Q9H8H0 719 aaKnown RBP12.41□□□□□ -0.42
GCN1-206ENST00000549815 PRM3Q9NNZ6 103 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 SACM1LQ9NTJ5 587 aa12.41□□□□□ -0.42
GCN1-206ENST00000549815 LYARQ9NX58 379 aaKnown RBP12.41□□□□□ -0.42
GCN1-206ENST00000549815 A0A1B0GVC2 190 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 A0A1W2PS29 197 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 STX16-NPEPL1H3BU86 382 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 ACOT7O00154 380 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 STX16O14662 325 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 URI1O94763 535 aaPredicted RBP12.4□□□□□ -0.42
GCN1-206ENST00000549815 CLDN9O95484 217 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 GPR75O95800 540 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 AIFM1O95831 613 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 RBP1P09455 135 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 FAM58BPP0C7Q3 252 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 TLX1P31314 330 aaPredicted RBP12.4□□□□□ -0.42
GCN1-206ENST00000549815 GALNSP34059 522 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 BUD31P41223 144 aaPredicted RBP12.4□□□□□ -0.42
GCN1-206ENST00000549815 DNASE1L1P49184 302 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 SLC37A1P57057 533 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 PHEXP78562 749 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 PLGLB1Q02325 96 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 TRAF3Q13114 568 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 SLC22A16Q86VW1 577 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 NUDT13Q86X67 352 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 FAM109AQ8N4B1 249 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 SLC15A4Q8N697 577 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 DOK4Q8TEW6 326 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 PAQR8Q8TEZ7 354 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 SDCCAG3Q96C92 435 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 ART5Q96L15 291 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 C16orf45Q96MC5 204 aaPredicted RBP12.4□□□□□ -0.42
GCN1-206ENST00000549815 NSUN5Q96P11 429 aaKnown RBP12.4□□□□□ -0.42
GCN1-206ENST00000549815 PAFAH2Q99487 392 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 SPOCK3Q9BQ16 436 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 PROK2Q9HC23 129 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 SEMA4BQ9NPR2 832 aaPredicted RBP12.4□□□□□ -0.42
GCN1-206ENST00000549815 TUBA8Q9NY65 449 aaPredicted RBP12.4□□□□□ -0.42
GCN1-206ENST00000549815 XPR1Q9UBH6 696 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 MTRF1LQ9UGC7 380 aaKnown RBP12.4□□□□□ -0.42
GCN1-206ENST00000549815 PCTPQ9UKL6 214 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 NCKAP5O14513 1909 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 HCFC1P51610 2035 aa12.4□□□□□ -0.42
GCN1-206ENST00000549815 A0A1B0GTL3 188 aa12.39□□□□□ -0.43
GCN1-206ENST00000549815 GLOD5A6NK44 160 aa12.39□□□□□ -0.43
GCN1-206ENST00000549815 SEMA3DO95025 777 aa12.39□□□□□ -0.43
GCN1-206ENST00000549815 ACSL3O95573 720 aa12.39□□□□□ -0.43
GCN1-206ENST00000549815 RPS17P08708 135 aaKnown RBP12.39□□□□□ -0.43
GCN1-206ENST00000549815 CELA3AP09093 270 aa12.39□□□□□ -0.43
GCN1-206ENST00000549815 SBK3P0C264 359 aa12.39□□□□□ -0.43
GCN1-206ENST00000549815 IGFBP2P18065 325 aa12.39□□□□□ -0.43
GCN1-206ENST00000549815 MAGEA5P43359 124 aa12.39□□□□□ -0.43
GCN1-206ENST00000549815 HERVK_113P63132 956 aa12.39□□□□□ -0.43
GCN1-206ENST00000549815 ERVK-8P63133 956 aa12.39□□□□□ -0.43
GCN1-206ENST00000549815 EBPQ15125 230 aaKnown RBP12.39□□□□□ -0.43
GCN1-206ENST00000549815 GXYLT1Q4G148 440 aa12.39□□□□□ -0.43
GCN1-206ENST00000549815 TMEM211Q6ICI0 200 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms