RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 OR52B6Q8NGF0 335 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 OR5L2Q8NGL0 311 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 SLC44A1Q8WWI5 657 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 SDCCAG3Q96C92 435 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 SGCZQ96LD1 299 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 LURAP1Q96LR2 239 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 CDK15Q96Q40 435 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 ACSS3Q9H6R3 686 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 RUBCNLQ9H714 662 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 MS4A12Q9NXJ0 267 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 PPT2Q9UMR5 302 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 PCDHGA11Q9Y5H2 935 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 LIPGQ9Y5X9 500 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 NINQ8N4C6 2090 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 TEP1Q99973 2627 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 FAM166BA8MTA8 275 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 PPP6CO00743 305 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 PGRMC2O15173 223 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 TOXO94900 526 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 TPOP07202 933 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 COX6B1P14854 86 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 ALOX15P16050 662 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 TYK2P29597 1187 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 SOX18P35713 384 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 PIGAP37287 484 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 MAGEA5P43359 124 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 PIK3CGP48736 1102 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 DNASE1L1P49184 302 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 SPRED3Q2MJR0 410 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 RTL6Q6ICC9 239 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 METTL2BQ6P1Q9 378 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 OPN5Q6U736 354 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 RGS9BPQ6ZS82 235 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 TRILQ7L0X0 811 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 ST13P4Q8IZP2 240 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 MMGT1Q8N4V1 131 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 NOA1Q8NC60 698 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 C7orf57Q8NEG2 295 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 LILRB4Q8NHJ6 448 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 PAQR8Q8TEZ7 354 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 NTNG2Q96CW9 530 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 RBM18Q96H35 190 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 FBXL20Q96IG2 436 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 FAM173AQ9BQD7 235 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 NTMT1Q9BV86 223 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 UCK2Q9BZX2 261 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 NOL11Q9H8H0 719 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 ACTR8Q9H981 624 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 IL1RL2Q9HB29 575 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 NPDC1Q9NQX5 325 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 PNPLA3Q9NST1 481 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 TUBA8Q9NY65 449 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 RNF6Q9Y252 685 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 HCFC1P51610 2035 aa10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 PHF3Q92576 2039 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-211ENST00000541667 GLOD5A6NK44 160 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 NPIPA2E9PIF3 369 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 NPIPA3F8WFD2 350 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 GBAP04062 536 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 RFPL3SP0C7P2 107 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 FAM58BPP0C7Q3 252 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 GFAPP14136 432 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 ENDOUP21128 410 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 GALNSP34059 522 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 SLC37A1P57057 533 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 NUP107P57740 925 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 NDUFAF5Q5TEU4 345 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 CEP128Q6ZU80 1094 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 GDF7Q7Z4P5 450 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 PTGR2Q8N8N7 351 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 ZNF441Q8N8Z8 693 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 C14orf79Q96F83 325 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 NSUN5Q96P11 429 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 DGAT2Q96PD7 388 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 VPS11Q9H270 941 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 TP63Q9H3D4 680 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 CDC42EP4Q9H3Q1 356 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 SACM1LQ9NTJ5 587 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 CPSF2Q9P2I0 782 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 TNFRSF10DQ9UBN6 386 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 PHF11Q9UIL8 331 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 ZNF225Q9UK10 706 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 PCTPQ9UKL6 214 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 ANGPTL3Q9Y5C1 460 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 TNPO3Q9Y5L0 923 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 FAM215AQ9Y5M1 114 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 CHCHD2Q9Y6H1 151 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 SPACA6W5XKT8 324 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 NCKAP5O14513 1909 aa10.89□□□□□ -0.67
CLSTN3-211ENST00000541667 STX16-NPEPL1H3BU86 382 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 STX16O14662 325 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 CLDN9O95484 217 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 AIFM1O95831 613 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 FBXO45P0C2W1 286 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 CT62P0C5K7 136 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 SLC35E2P0CK97 266 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 S1PR1P21453 382 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 ELAVL4P26378 380 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 GCAP28676 217 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 SERPINB8P50452 374 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms