RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 CLDN2P57739 230 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 DCST1Q5T197 706 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 AGAP7PQ5VUJ5 663 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 FAM71E1Q6IPT2 247 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 METTL2BQ6P1Q9 378 aaKnown RBP13.41□□□□□ -0.26
INO80E-203ENST00000540562 OXR1Q8N573 874 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 ZG16BQ96DA0 208 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 MMP27Q9H306 513 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 BRF2Q9HAW0 419 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 MRPS23Q9Y3D9 190 aaKnown RBP13.41□□□□□ -0.26
INO80E-203ENST00000540562 HSPE1-MOB4S4R3N1 261 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 A0A1B0GVC2 190 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 A6NIN4 97 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 LCMT2O60294 686 aaKnown RBP13.41□□□□□ -0.26
INO80E-203ENST00000540562 MYOGP15173 224 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 XKP51811 444 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 REEP3Q6NUK4 255 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 TCTN3Q6NUS6 607 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 TRIM48Q8IWZ4 208 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 CCDC116Q8IYX3 515 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 GATAD2BQ8WXI9 593 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 BHLHE41Q9C0J9 482 aaPredicted RBP13.41□□□□□ -0.26
INO80E-203ENST00000540562 RC3H2Q9HBD1 1191 aaKnown RBP13.41□□□□□ -0.26
INO80E-203ENST00000540562 ZCCHC3Q9NUD5 404 aaKnown RBP13.41□□□□□ -0.26
INO80E-203ENST00000540562 PPIL1Q9Y3C6 166 aa13.41□□□□□ -0.26
INO80E-203ENST00000540562 TBC1D3BA6NDS4 549 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 CDRT1O95170 752 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 TNFSF8P32971 234 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 RAB25P57735 213 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 CDKL4Q5MAI5 379 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 TTC23LQ6PF05 361 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 CCDC149Q6ZUS6 474 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 METTL3Q86U44 580 aaKnown RBP13.4□□□□□ -0.26
INO80E-203ENST00000540562 DEPDC4Q8N2C3 294 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 KBTBD8Q8NFY9 601 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 SLC9A6Q92581 669 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 KAT2AQ92830 837 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 RSPRY1Q96DX4 576 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 C16orf58Q96GQ5 468 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 SIGLEC11Q96RL6 698 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 GPA33Q99795 319 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 KLHL31Q9H511 634 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 FZD3Q9NPG1 666 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 CORO2BQ9UQ03 480 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 SNRNP200O75643 2136 aaKnown RBP13.4□□□□□ -0.26
INO80E-203ENST00000540562 PDPK1O15530 556 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 SPINT1O43278 529 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 PRKYO43930 277 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 NCR1O76036 304 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 EPHX1P07099 455 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 SOX6P35712 828 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 GPAT3Q53EU6 434 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 ATAT1Q5SQI0 421 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 USP30Q70CQ3 517 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 LHFPL3Q86UP9 236 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 C17orf64Q86WR6 236 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 GALNT13Q8IUC8 556 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 CHCHD4Q8N4Q1 142 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 ZNF689Q96CS4 500 aaPredicted RBP13.4□□□□□ -0.26
INO80E-203ENST00000540562 DTD2Q96FN9 168 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 PAWRQ96IZ0 340 aaKnown RBP13.4□□□□□ -0.26
INO80E-203ENST00000540562 TSSK6Q9BXA6 273 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 BARHL1Q9BZE3 327 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 ZDHHC5Q9C0B5 715 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 DYRK4Q9NR20 520 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 KCNE3Q9Y6H6 103 aa13.4□□□□□ -0.26
INO80E-203ENST00000540562 GSAPA4D1B5 854 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 IGLON5A6NGN9 336 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 CCRL2O00421 344 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 UGDHO60701 494 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 CSO75390 466 aaKnown RBP13.39□□□□□ -0.27
INO80E-203ENST00000540562 TBX6O95947 436 aaPredicted RBP13.39□□□□□ -0.27
INO80E-203ENST00000540562 PAK4O96013 591 aaPredicted RBP13.39□□□□□ -0.27
INO80E-203ENST00000540562 CYP17A1P05093 508 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 ITGA2P17301 1181 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 GABRB1P18505 474 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 PPIBP23284 216 aaKnown RBP13.39□□□□□ -0.27
INO80E-203ENST00000540562 SSR2P43308 183 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 AVPR1BP47901 424 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 CCT3P49368 545 aaKnown RBP13.39□□□□□ -0.27
INO80E-203ENST00000540562 KRT33BQ14525 404 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 BAK1Q16611 211 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 ARMC4Q5T2S8 1044 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 RD3Q7Z3Z2 195 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 SLC9B2Q86UD5 537 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 FAM129CQ86XR2 697 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 OR8K5Q8NH50 307 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 UBASH3BQ8TF42 649 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 POF1BQ8WVV4 589 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 REPS1Q96D71 796 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 C1GALT1C1Q96EU7 318 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 FCRL1Q96LA6 429 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 TREX2Q9BQ50 279 aaPredicted RBP13.39□□□□□ -0.27
INO80E-203ENST00000540562 TTYH2Q9BSA4 534 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 EFCAB11Q9BUY7 163 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 TTTY10Q9BZA0 68 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 IRAK3Q9Y616 596 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 SPIN1Q9Y657 262 aaPredicted RBP13.39□□□□□ -0.27
INO80E-203ENST00000540562 PRAMEF27A3QJZ7 478 aa13.39□□□□□ -0.27
INO80E-203ENST00000540562 HBQ1P09105 142 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms