RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 APLFQ8IW19 511 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 CCDC36Q8IYA8 594 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 EID3Q8N140 333 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 C9orf106Q8NAJ2 232 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SMYD1Q8NB12 490 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SPC24Q8NBT2 197 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 LPCAT1Q8NF37 534 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 RDH11Q8TC12 318 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 MRGPRDQ8TDS7 321 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 CDKN2AIPNLQ96HQ2 116 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ZNF479Q96JC4 524 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 C9orf85Q96MD7 179 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 LPAR4Q99677 370 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 RBM4BQ9BQ04 359 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 MRIQ9BWK5 157 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 PANK3Q9H999 370 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TM9SF3Q9HD45 589 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SOHLH2Q9NX45 425 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 C19orf25Q9UFG5 118 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ISY1Q9ULR0 285 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 DHRS7Q9Y394 339 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 JRKLQ9Y4A0 524 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 LRP12Q9Y561 859 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ZMYM6O95789 1325 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 PHLPP2Q6ZVD8 1323 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 BRD4O60885 1362 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 PTCH1Q13635 1447 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ABCC10Q5T3U5 1492 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 RALGAPA1Q6GYQ0 2036 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SHANK3Q9BYB0 1731 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 A0A0A6YYD4 124 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 PPIAL4CA0A0B4J2A2 164 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TRBV7-9A0A0J9YWB2 115 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 A0A1W2PR80 420 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ERVV-2B6SEH9 535 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 BLOC1S5-TXNDC5H3BN57 136 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 M0QX08 132 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 BMPR1BO00238 502 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 NTN3O00634 580 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SYT7O43581 403 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TYROBPO43914 113 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 NEMFO60524 1076 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 STAM2O75886 525 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 GLCEO94923 617 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 BRI3O95415 125 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TXNDC12O95881 172 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 RHOXF2BP0C7M4 288 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 PPIAL4GP0DN37 164 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 CKMT2P17540 419 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 CCNA2P20248 432 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 CD9P21926 228 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 CHMLP26374 656 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 C21orf33P30042 268 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TAGLN2P37802 199 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 NSFP46459 744 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SERPINH1P50454 418 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TKTL1P51854 596 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 LBX1P52954 281 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 METAP1P53582 386 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 RND3P61587 244 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 CX3CL1P78423 397 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 EFTUD2Q15029 972 aaKnown RBP eCLIP0.91□□□□□ -2.263e-7■■■■□ 24.9
HIF1A-204ENST00000539097 PDK3Q15120 406 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 FAM106AQ4KMX7 169 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 CEP55Q53EZ4 464 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 LDLRAP1Q5SW96 308 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 PRAMEF7Q5VXH5 474 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ARMCX5Q6P1M9 558 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 MFSD7Q6UXD7 560 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 CENPUQ71F23 418 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SLC24A5Q71RS6 500 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SCD5Q86SK9 330 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 FAM131BQ86XD5 332 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SFR1Q86XK3 245 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TBC1D21Q8IYX1 336 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ELMOD2Q8IZ81 293 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 STEAP2Q8NFT2 490 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 OR6C4Q8NGE1 309 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 OR4C3Q8NH37 302 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SUSD6Q92537 303 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TBC1D31Q96DN5 1066 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TM4SF19Q96DZ7 209 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 RAB3CQ96E17 227 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 LINGO1Q96FE5 620 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 BSCL2Q96G97 398 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 C8orf76Q96K31 380 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 NSMCE2Q96MF7 247 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 OPRPNQ99935 248 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 KCTD14Q9BQ13 255 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 RHOXF2Q9BQY4 288 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TRIM51Q9BSJ1 452 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 RBM38Q9H0Z9 239 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SIRPDQ9H106 197 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 C5orf66Q9H5L9 145 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SDF2L1Q9HCN8 221 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ZKSCAN7Q9P0L1 754 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 KLHDC2Q9Y2U9 406 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ANGPTL3Q9Y5C1 460 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 USP42Q9H9J4 1324 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 USP47Q96K76 1375 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms