RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 CEBPDP49716 269 aaPredicted RBP3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 PRRX1P54821 245 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 INHBCP55103 352 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 PPIAP62937 165 aaKnown RBP3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 HERVK_113P63132 956 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 ERVK-8P63133 956 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 SSBP2P81877 361 aaPredicted RBP3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 DPTQ07507 201 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 TMED1Q13445 227 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 EXOSC2Q13868 293 aaKnown RBP3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 FHL2Q14192 279 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 TAF13Q15543 124 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 DUSP5Q16690 384 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 ACSF3Q4G176 576 aaPredicted RBP3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 FGD3Q5JSP0 725 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 MORN5Q5VZ52 161 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 TTC23Q5W5X9 447 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 ZNF626Q68DY1 528 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 FIP1L1Q6UN15 594 aaKnown RBP3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 CWC27Q6UX04 472 aaKnown RBP3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 WASH2PQ6VEQ5 465 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 RD3Q7Z3Z2 195 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 NANOGNBQ7Z5D8 188 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 CACUL1Q86Y37 369 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 CCDC36Q8IYA8 594 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 TTC5Q8N0Z6 440 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 ELMOD1Q8N336 334 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 PARP8Q8N3A8 854 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 FAM89BQ8N5H3 189 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 CCDC185Q8N715 623 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 ANKFN1Q8N957 763 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 CNBD1Q8NA66 436 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 MLKLQ8NB16 471 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 DDHD1Q8NEL9 900 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 OR6C4Q8NGE1 309 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 WDR36Q8NI36 951 aaKnown RBP3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 TRMT10AQ8TBZ6 339 aaKnown RBP3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 AGR3Q8TD06 166 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 GPR148Q8TDV2 347 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 TMED6Q8WW62 240 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 TCP11Q8WWU5 503 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 SLC25A36Q96CQ1 311 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 RTP4Q96DX8 246 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 PHF21BQ96EK2 531 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 LMLNQ96KR4 655 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 LRRC1Q9BTT6 524 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 SF3B5Q9BWJ5 86 aaKnown RBP3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 ERVK-6Q9BXR3 956 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 NLNQ9BYT8 704 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 PKIBQ9C010 78 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 RPAP3Q9H6T3 665 aaPredicted RBP3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 METTL7AQ9H8H3 244 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 CRLF2Q9HC73 371 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 GDF3Q9NR23 364 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 ETNK2Q9NVF9 386 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 RAB20Q9NX57 234 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 POLKQ9UBT6 870 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 C19orf25Q9UFG5 118 aaPredicted RBP3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 CRLS1Q9UJA2 301 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 ELF5Q9UKW6 265 aaPredicted RBP3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 POMT2Q9UKY4 750 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 MYO6Q9UM54 1294 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 ZNF175Q9Y473 711 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 AP4B1Q9Y6B7 739 aa3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 POLA1P09884 1462 aaPredicted RBP3.16□□□□□ -1.9
AMBRA1-208ENST00000529558 FAM240BA0A1B0GVZ2 78 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 GOLGA8OA6NCC3 632 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 FAM25EA8MYX2 175 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 GOLGA8NF8WBI6 632 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 H3BTX0 84 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 KLF11O14901 512 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 EPHB6O15197 1021 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 ZNF208O43345 1280 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 BUB1O43683 1085 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 CACNG3O60359 315 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 JAK2O60674 1132 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 FZD7O75084 574 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 SERPINA3P01011 423 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 ANXA4P09525 319 aaPredicted RBP3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 FRMD6-AS1P0C7T7 363 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 ZNF44P15621 663 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 UQCRC2P22695 453 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 CYLC1P35663 651 aaPredicted RBP3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 MATKP42679 507 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 ABCG1P45844 678 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 RPL23AP62750 156 aaKnown RBP3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 TUBA1BP68363 451 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 CDKL1Q00532 357 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 HYAL1Q12794 435 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 SRSF9Q13242 221 aaKnown RBP eCLIP3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 PLD1Q13393 1074 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 RCN1Q15293 331 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 SF3B4Q15427 424 aaKnown RBP eCLIP3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 C3AR1Q16581 482 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 EXOC3L2Q2M3D2 409 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 PARP6Q2NL67 630 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 GLIPR1L2Q4G1C9 344 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 LINC01620Q4KN68 170 aa3.15□□□□□ -1.91
AMBRA1-208ENST00000529558 HSP90AB3PQ58FF7 597 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms