RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 HNRNPA1L2Q32P51 320 aaKnown RBP4.38□□□□□ -1.71
CSDE1-212ENST00000529046 TTC31Q49AM3 519 aaPredicted RBP4.38□□□□□ -1.71
CSDE1-212ENST00000529046 ACCSLQ4AC99 568 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 FAM98BQ52LJ0 330 aaKnown RBP4.38□□□□□ -1.71
CSDE1-212ENST00000529046 FAM133BQ5BKY9 247 aaKnown RBP4.38□□□□□ -1.71
CSDE1-212ENST00000529046 CCNYL2Q5T2Q4 361 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 C9orf64Q5T6V5 341 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 ZNF776Q68DI1 518 aaPredicted RBP4.38□□□□□ -1.71
CSDE1-212ENST00000529046 PMF1Q6P1K2 205 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 TMEM110Q86TL2 294 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 IQCHQ86VS3 1027 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 DNAAF5Q86Y56 855 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 SIX6OS1Q8N1H7 587 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 DEFB119Q8N690 84 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 LSMEM1Q8N8F7 131 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 PAPD5Q8NDF8 572 aaKnown RBP4.38□□□□□ -1.71
CSDE1-212ENST00000529046 OR10S1Q8NGN2 331 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 BIRC7Q96CA5 298 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 ERLEC1Q96DZ1 483 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 ARSGQ96EG1 525 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 EEF2KMTQ96G04 330 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 BTN2A3PQ96KV6 586 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 C17orf77Q96MU5 243 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 SERPINB11Q96P15 392 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 GOLPH3LQ9H4A5 285 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 SLA2Q9H6Q3 261 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 TM9SF3Q9HD45 589 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 MBNL1Q9NR56 388 aaKnown RBP4.38□□□□□ -1.71
CSDE1-212ENST00000529046 ABCB8Q9NUT2 735 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 NKIRAS2Q9NYR9 191 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 RPS6KA6Q9UK32 745 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 NCKAP1Q9Y2A7 1128 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 AKAP13Q12802 2813 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 NBEAQ8NFP9 2946 aa4.38□□□□□ -1.71
CSDE1-212ENST00000529046 PI4KAP42356 2102 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 DSPP15924 2871 aaKnown RBP4.37□□□□□ -1.71
CSDE1-212ENST00000529046 A0A1B0GTQ1 180 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 A0A1W2PPI3 338 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 FEZF1A0PJY2 475 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 BICDL2A1A5D9 508 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 C15orf62A8K5M9 175 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 PSMA7O14818 248 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 ALOX15BO15296 676 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 MED7O43513 233 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 MAGEC1O60732 1142 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 CTSVO60911 334 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 MOCS3O95396 460 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 IGHV4-34P06331 123 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 HMBSP08397 361 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 GOT1P17174 413 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 NR1D1P20393 614 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 HOXA1P49639 335 aaPredicted RBP4.37□□□□□ -1.71
CSDE1-212ENST00000529046 CSNK1EP49674 416 aaKnown RBP4.37□□□□□ -1.71
CSDE1-212ENST00000529046 PPP2R2BQ00005 443 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 KIR2DS3Q14952 304 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 NR1D2Q14995 579 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 MS4A13Q5J8X5 152 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 NEK5Q6P3R8 708 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 TMEM270Q6UE05 265 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 GSG1LQ6UXU4 331 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 PIWIL4Q7Z3Z4 852 aaKnown RBP4.37□□□□□ -1.71
CSDE1-212ENST00000529046 MFN1Q8IWA4 741 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 CIARTQ8N365 385 aaPredicted RBP4.37□□□□□ -1.71
CSDE1-212ENST00000529046 OR2T34Q8NGX1 318 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 ABHD1Q96SE0 405 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 THAP9Q9H5L6 903 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 POPDC2Q9HBU9 364 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 TCF7L2Q9NQB0 619 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 ABCF3Q9NUQ8 709 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 SLC12A6Q9UHW9 1150 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 WDFY3Q8IZQ1 3526 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 FAM208BQ5VWN6 2430 aa4.37□□□□□ -1.71
CSDE1-212ENST00000529046 COL5A1P20908 1838 aaPredicted RBP4.37□□□□□ -1.71
CSDE1-212ENST00000529046 CEP192Q8TEP8 1941 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 ITPR1Q14643 2758 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 MUC22E2RYF6 1773 aaPredicted RBP4.36□□□□□ -1.71
CSDE1-212ENST00000529046 A0A0B4J293 547 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 EDDM13A0A1B0GTR0 161 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 GTPBP10A4D1E9 387 aaKnown RBP4.36□□□□□ -1.71
CSDE1-212ENST00000529046 MCF2LO15068 1137 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 OR10H2O60403 315 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 TBL1XO60907 577 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 LUC7L3O95232 432 aaKnown RBP4.36□□□□□ -1.71
CSDE1-212ENST00000529046 FGFR1OPO95684 399 aaKnown RBP4.36□□□□□ -1.71
CSDE1-212ENST00000529046 TFAP2AP05549 437 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 HLA-EP13747 358 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 PAX1P15863 534 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 AMD1P17707 334 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 CCR1P32246 355 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 CD70P32970 193 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 ARRB1P49407 418 aaPredicted RBP4.36□□□□□ -1.71
CSDE1-212ENST00000529046 NUCB2P80303 420 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 PNOCQ13519 176 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 CDH18Q13634 790 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 ELAVL3Q14576 367 aaKnown RBP4.36□□□□□ -1.71
CSDE1-212ENST00000529046 CST6Q15828 149 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 GRTP1Q5TC63 336 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 SFMBT2Q5VUG0 894 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 FAM46CQ5VWP2 391 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 RFWD3Q6PCD5 774 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms