RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 NAB1Q13506 487 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 SEMA3AQ14563 771 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 CASP8Q14790 479 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 PTGR1Q14914 329 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 UAP1Q16222 522 aaPredicted RBP4.3□□□□□ -1.72
USP48-211ENST00000526044 PLK5Q496M5 336 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 LDLRAP1Q5SW96 308 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 GPRC6AQ5T6X5 926 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 ZNF470Q6ECI4 717 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 PTRHD1Q6GMV3 140 aaKnown RBP4.3□□□□□ -1.72
USP48-211ENST00000526044 HMBOX1Q6NT76 420 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 CNSTQ6PJW8 725 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 UNC5DQ6UXZ4 953 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 ABI3BPQ7Z7G0 1075 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 GALNT7Q86SF2 657 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 CROCCP2Q86T23 111 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 SLC26A11Q86WA9 606 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 DENND6AQ8IWF6 608 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 CNTN4Q8IWV2 1026 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 PIANPQ8IYJ0 282 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 RBFAQ8N0V3 343 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 IQCKQ8N0W5 287 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 PELI3Q8N2H9 469 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 LILRB1Q8NHL6 650 aaPredicted RBP4.3□□□□□ -1.72
USP48-211ENST00000526044 THAP4Q8WY91 577 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 SGF29Q96ES7 293 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 COX14Q96I36 57 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 MAELQ96JY0 434 aaKnown RBP4.3□□□□□ -1.72
USP48-211ENST00000526044 COPS8Q99627 209 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 CPNE1Q99829 537 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 ROPN1BQ9BZX4 212 aaPredicted RBP4.3□□□□□ -1.72
USP48-211ENST00000526044 CLPBQ9H078 707 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 CCDC68Q9H2F9 335 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 ROPN1Q9HAT0 212 aaPredicted RBP4.3□□□□□ -1.72
USP48-211ENST00000526044 ZNF304Q9HCX3 659 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 FBXO6Q9NRD1 293 aaPredicted RBP4.3□□□□□ -1.72
USP48-211ENST00000526044 SMOXQ9NWM0 555 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 MARCH4Q9P2E8 410 aaPredicted RBP4.3□□□□□ -1.72
USP48-211ENST00000526044 ATXN10Q9UBB4 475 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 KLQ9UEF7 1012 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 TBC1D29Q9UFV1 150 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 FETUBQ9UGM5 382 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 SLC24A2Q9UI40 661 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 MOSPD1Q9UJG1 213 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 CA5BQ9Y2D0 317 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 OR1A2Q9Y585 309 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 KMT2EQ8IZD2 1858 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 ABCA7Q8IZY2 2146 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 IGLV3-16A0A075B6K0 115 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 IQANK1A0A1B0GTG1 560 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 TMEM247A6NEH6 219 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 PGPEP1LA6NFU8 196 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 TMEM202A6NGA9 273 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 NPIPB13A6NJU9 1138 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 OR2AG2A6NM03 316 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 NPIPB5A8MRT5 1133 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 GPR89AB7ZAQ6 455 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 NPIPB4C9JG80 1138 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 H3BMM5 538 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 TLR4O00206 839 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 PRMT5O14744 637 aaPredicted RBP4.29□□□□□ -1.72
USP48-211ENST00000526044 RASGRF2O14827 1237 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 VILLO15195 856 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 GRID2O43424 1007 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 ATP8B1O43520 1251 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 OR1I1O60431 355 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 KCNJ13O60928 360 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 MTX2O75431 263 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 POP7O75817 140 aaKnown RBP4.29□□□□□ -1.72
USP48-211ENST00000526044 AP2A2O94973 939 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 TRIM16O95361 564 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 NTN1O95631 604 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 HSPA4LO95757 839 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 SOD1P00441 154 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 C1QAP02745 245 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 IVLP07476 585 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 SNRPAP09012 282 aaKnown RBP4.29□□□□□ -1.72
USP48-211ENST00000526044 NUDT17P0C025 328 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 OR56A5P0C7T3 313 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 GPR89BP0CG08 455 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 THEGLP0DJG4 465 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 ZNF8P17098 575 aaPredicted RBP4.29□□□□□ -1.72
USP48-211ENST00000526044 HOXB6P17509 224 aaKnown RBP4.29□□□□□ -1.72
USP48-211ENST00000526044 SAT1P21673 171 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 ATP6V1E1P36543 226 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 SKIV2L2P42285 1042 aaKnown RBP4.29□□□□□ -1.72
USP48-211ENST00000526044 SLC1A2P43004 574 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 SLCO1A2P46721 670 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 CD151P48509 253 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 POLD2P49005 469 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 CSNK1EP49674 416 aaKnown RBP4.29□□□□□ -1.72
USP48-211ENST00000526044 SERPINB9P50453 376 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 RPS6KA3P51812 740 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 CSE1LP55060 971 aaKnown RBP4.29□□□□□ -1.72
USP48-211ENST00000526044 ADARP55265 1226 aaKnown RBP4.29□□□□□ -1.72
USP48-211ENST00000526044 C21orf59P57076 290 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 KIAA1024LP59773 190 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 NFATC4Q14934 902 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 DUOXA1Q1HG43 343 aa4.29□□□□□ -1.72
USP48-211ENST00000526044 TYSND1Q2T9J0 566 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms