RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 A0A087WV48 116 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 TRBV4-1A0A0J9YWV2 114 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 A0A1W2PRQ8 180 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 MSGN1A6NI15 193 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 PP2D1A8MPX8 630 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 LAD1O00515 517 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 ARHGEF9O43307 516 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 PRAF2O60831 178 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 SLITRK3O94933 977 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 LYPLA2O95372 231 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 IQCF3P0C7M6 154 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 RFC2P35250 354 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 ANP32AP39687 249 aaKnown RBP3.36□□□□□ -1.87
CD44-219ENST00000525685 MMP12P39900 470 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 PRPHP41219 470 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 QARSP47897 775 aaKnown RBP3.36□□□□□ -1.87
CD44-219ENST00000525685 NAGLUP54802 743 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 PSMC5P62195 406 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 IL10RBQ08334 325 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 MGAT3Q09327 533 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 GPNMBQ14956 572 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 TMEM132DQ14C87 1099 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 IL17AQ16552 155 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 GPR33Q49SQ1 333 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 TRIM65Q6PJ69 517 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 SLC25A47Q6Q0C1 308 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 FIP1L1Q6UN15 594 aaKnown RBP3.36□□□□□ -1.87
CD44-219ENST00000525685 MSANTD1Q6ZTZ1 278 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 EGFL6Q8IUX8 553 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 TDHQ8IZJ6 230 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 FAM89BQ8N5H3 189 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 GOT1L1Q8NHS2 421 aaPredicted RBP3.36□□□□□ -1.87
CD44-219ENST00000525685 UBLCP1Q8WVY7 318 aaPredicted RBP3.36□□□□□ -1.87
CD44-219ENST00000525685 APOBEC4Q8WW27 367 aaKnown RBP3.36□□□□□ -1.87
CD44-219ENST00000525685 PIK3R3Q92569 461 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 AZIN2Q96A70 460 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 KLHL5Q96PQ7 755 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 USP28Q96RU2 1077 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 ASCL2Q99929 193 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 HSD17B14Q9BPX1 270 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 THAP2Q9H0W7 228 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 RPF1Q9H9Y2 349 aaKnown RBP3.36□□□□□ -1.87
CD44-219ENST00000525685 ARMCX3Q9UH62 379 aaPredicted RBP3.36□□□□□ -1.87
CD44-219ENST00000525685 ITGA11Q9UKX5 1188 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 ANGPTL3Q9Y5C1 460 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 MYH9P35579 1960 aaKnown RBP3.36□□□□□ -1.87
CD44-219ENST00000525685 CENPFP49454 3210 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 GBF1Q92538 1859 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 LOXHD1Q8IVV2 1947 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 IGLV7-46A0A075B6I9 117 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 A0A087WUV0 522 aaPredicted RBP3.35□□□□□ -1.87
CD44-219ENST00000525685 A0A087WWV3 80 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 IGKV6-21A0A0C4DH24 114 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 TRBV5-5A0A0J9YX44 114 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.35□□□□□ -1.87
CD44-219ENST00000525685 RSPH10B2B2RC85 870 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 C17orf105B2RV13 164 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 E5RGE8 158 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 E9PMD0 336 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 F8VVB4 439 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 F8VWA3 439 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 H0YAE9 185 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 TEX28O15482 410 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 FLRT2O43155 660 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 CLDN1O95832 211 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 IGHEP01854 428 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 CHRNA1P02708 482 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 CXCL10P02778 98 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 VTNP04004 478 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 RSPH10BP0C881 870 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 GHRP10912 638 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 F3P13726 295 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 LBPP18428 481 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 ADRA2CP18825 462 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 TYMPP19971 482 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 AADACP22760 399 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 RPA1P27694 616 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 TLX1P31314 330 aaPredicted RBP3.35□□□□□ -1.87
CD44-219ENST00000525685 YWHABP31946 246 aaKnown RBP3.35□□□□□ -1.87
CD44-219ENST00000525685 CCT6AP40227 531 aaKnown RBP3.35□□□□□ -1.87
CD44-219ENST00000525685 XGP55808 180 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 MRPS6P82932 125 aaKnown RBP3.35□□□□□ -1.87
CD44-219ENST00000525685 DRP2Q13474 957 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 CDH18Q13634 790 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 EMC2Q15006 297 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 SHHQ15465 462 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 EXT1Q16394 746 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 LBHQ53QV2 105 aaPredicted RBP3.35□□□□□ -1.87
CD44-219ENST00000525685 NOTUMQ6P988 496 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 MACC1Q6ZN28 852 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 TMEM182Q6ZP80 229 aaPredicted RBP3.35□□□□□ -1.87
CD44-219ENST00000525685 DEFB128Q7Z7B8 93 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 RPAINQ86UA6 219 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 CATSPER3Q86XQ3 398 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 METTL13Q8N6R0 699 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 LRTM2Q8N967 370 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 ERMNQ8TAM6 284 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 DNAJB3Q8WWF6 145 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 CEP170P1Q96L14 293 aa3.35□□□□□ -1.87
CD44-219ENST00000525685 GDAP1L1Q96MZ0 367 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms