RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 FOXD4Q12950 439 aaPredicted RBP22.04■■□□□ 1.12
USP47-205ENST00000525257 TBCCQ15814 346 aa22.04■■□□□ 1.12
USP47-205ENST00000525257 ZBED8Q8IZ13 594 aa22.04■■□□□ 1.12
USP47-205ENST00000525257 LRRC25Q8N386 305 aaPredicted RBP22.04■■□□□ 1.12
USP47-205ENST00000525257 LIX1Q8N485 282 aa22.04■■□□□ 1.12
USP47-205ENST00000525257 BBOF1Q8ND07 529 aa22.04■■□□□ 1.12
USP47-205ENST00000525257 OR10G3Q8NGC4 313 aa22.04■■□□□ 1.12
USP47-205ENST00000525257 NEIL3Q8TAT5 605 aa22.04■■□□□ 1.12
USP47-205ENST00000525257 ART5Q96L15 291 aa22.04■■□□□ 1.12
USP47-205ENST00000525257 GAL3ST4Q96RP7 486 aa22.04■■□□□ 1.12
USP47-205ENST00000525257 PROK2Q9HC23 129 aa22.04■■□□□ 1.12
USP47-205ENST00000525257 RNF112Q9ULX5 631 aa22.04■■□□□ 1.12
USP47-205ENST00000525257 HSPB2A8KAH6 182 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 SYT5O00445 386 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 PROM1O43490 865 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 WNT3P56703 355 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 ATP6V0D1P61421 351 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 PLIN5Q00G26 463 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 SLAMF1Q13291 335 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 HSPB2Q16082 182 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 MED27Q6P2C8 311 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 CHSY3Q70JA7 882 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 LRRC70Q7Z2Q7 622 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 CDC20BQ86Y33 519 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 RNF175Q8N4F7 328 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 SLC15A4Q8N697 577 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 NAXEQ8NCW5 288 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 GOT1L1Q8NHS2 421 aaPredicted RBP22.03■■□□□ 1.12
USP47-205ENST00000525257 UBE2E3Q969T4 207 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 RBM18Q96H35 190 aaKnown RBP22.03■■□□□ 1.12
USP47-205ENST00000525257 FBXL20Q96IG2 436 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 CD244Q9BZW8 370 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 OR51B5Q9H339 312 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 RPF2Q9H7B2 306 aaKnown RBP22.03■■□□□ 1.12
USP47-205ENST00000525257 ACKR4Q9NPB9 350 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 CHCHD2Q9Y6H1 151 aaPredicted RBP22.03■■□□□ 1.12
USP47-205ENST00000525257 NINQ8N4C6 2090 aa22.03■■□□□ 1.12
USP47-205ENST00000525257 A6NNC1 897 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 CXorf49A8MYA2 514 aaPredicted RBP22.02■■□□□ 1.12
USP47-205ENST00000525257 KDM4EB2RXH2 506 aaPredicted RBP22.02■■□□□ 1.12
USP47-205ENST00000525257 E7ESA3 106 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 PRKRAO75569 313 aaKnown RBP22.02■■□□□ 1.12
USP47-205ENST00000525257 FREM3P0C091 2139 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 GMPRP36959 345 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 PEX19P40855 299 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 CASP2P42575 452 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 ASCL1P50553 236 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 HERVK_113P63132 956 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 ERVK-8P63133 956 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 TBL3Q12788 808 aaKnown RBP22.02■■□□□ 1.12
USP47-205ENST00000525257 FLYWCH1Q4VC44 716 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 KHDRBS2Q5VWX1 349 aaKnown RBP22.02■■□□□ 1.12
USP47-205ENST00000525257 OR4C11Q6IEV9 310 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 LAS2Q8IYD9 372 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 C7orf57Q8NEG2 295 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 TNIP2Q8NFZ5 429 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 SH3GL2Q99962 352 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 ERVK-6Q9BXR3 956 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 DMRT3Q9NQL9 472 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.02■■□□□ 1.12
USP47-205ENST00000525257 QPCTLQ9NXS2 382 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 CNIH4Q9P003 139 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 ERVK-19Q9WJR5 959 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 PCDHGB3Q9Y5G1 929 aa22.02■■□□□ 1.12
USP47-205ENST00000525257 C15orf38-AP3S2A0A0A6YYH1 394 aa22.01■■□□□ 1.11
USP47-205ENST00000525257 DVL2O14641 736 aa22.01■■□□□ 1.11
USP47-205ENST00000525257 FBXO45P0C2W1 286 aa22.01■■□□□ 1.11
USP47-205ENST00000525257 ALOX15P16050 662 aaPredicted RBP22.01■■□□□ 1.11
USP47-205ENST00000525257 STMN1P16949 149 aa22.01■■□□□ 1.11
USP47-205ENST00000525257 TCP1P17987 556 aaKnown RBP22.01■■□□□ 1.11
USP47-205ENST00000525257 GDF1P27539 372 aa22.01■■□□□ 1.11
USP47-205ENST00000525257 DDX39BQ13838 428 aaKnown RBP22.01■■□□□ 1.11
USP47-205ENST00000525257 E2F2Q14209 437 aa22.01■■□□□ 1.11
USP47-205ENST00000525257 C18orf63Q68DL7 685 aa22.01■■□□□ 1.11
USP47-205ENST00000525257 SLC29A4Q7RTT9 530 aa22.01■■□□□ 1.11
USP47-205ENST00000525257 OR7G3Q8NG95 312 aa22.01■■□□□ 1.11
USP47-205ENST00000525257 CMTM7Q96FZ5 175 aa22.01■■□□□ 1.11
USP47-205ENST00000525257 DOHHQ9BU89 302 aa22.01■■□□□ 1.11
USP47-205ENST00000525257 GSX1Q9H4S2 264 aaPredicted RBP22.01■■□□□ 1.11
USP47-205ENST00000525257 TXNDC16Q9P2K2 825 aa22.01■■□□□ 1.11
USP47-205ENST00000525257 CNOT11Q9UKZ1 510 aaKnown RBP22.01■■□□□ 1.11
USP47-205ENST00000525257 CBLCQ9ULV8 474 aa22.01■■□□□ 1.11
USP47-205ENST00000525257 IQANK1A0A1B0GTG1 560 aa22■■□□□ 1.11
USP47-205ENST00000525257 SERPINB3P29508 390 aa22■■□□□ 1.11
USP47-205ENST00000525257 RAP1GDS1P52306 607 aa22■■□□□ 1.11
USP47-205ENST00000525257 DGKQP52824 942 aa22■■□□□ 1.11
USP47-205ENST00000525257 TNFRSF17Q02223 184 aa22■■□□□ 1.11
USP47-205ENST00000525257 ILF2Q12905 390 aaKnown RBP22■■□□□ 1.11
USP47-205ENST00000525257 ZNF267Q14586 743 aaPredicted RBP22■■□□□ 1.11
USP47-205ENST00000525257 ACSF3Q4G176 576 aaPredicted RBP22■■□□□ 1.11
USP47-205ENST00000525257 DEPDC1Q5TB30 811 aa22■■□□□ 1.11
USP47-205ENST00000525257 RNF111Q6ZNA4 994 aa22■■□□□ 1.11
USP47-205ENST00000525257 GPR180Q86V85 440 aa22■■□□□ 1.11
USP47-205ENST00000525257 DND1Q8IYX4 353 aaKnown RBP22■■□□□ 1.11
USP47-205ENST00000525257 MMP21Q8N119 569 aa22■■□□□ 1.11
USP47-205ENST00000525257 FAM222BQ8WU58 562 aa22■■□□□ 1.11
USP47-205ENST00000525257 TANKQ92844 425 aa22■■□□□ 1.11
USP47-205ENST00000525257 RNASE6Q93091 150 aaKnown RBP22■■□□□ 1.11
USP47-205ENST00000525257 LRRC46Q96FV0 321 aa22■■□□□ 1.11
USP47-205ENST00000525257 ALPK1Q96QP1 1244 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms