RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 C1orf226A1L170 272 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 SAGE2PA6NJ88 616 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 GABRR3A8MPY1 467 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 E9PBE3 544 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 WWP2O00308 870 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF195O14628 629 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 KLF11O14901 512 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 HDAC3O15379 428 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 ATP8B1O43520 1251 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 KLHL41O60662 606 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 EDF1O60869 148 aaKnown RBP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 DDAH2O95865 285 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 HPP00738 406 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 IGHEP01854 428 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 C1QCP02747 245 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 ABCB1P08183 1280 aaPredicted RBP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 CD63P08962 238 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 LAMP1P11279 417 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 CPMP14384 443 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 PCSK2P16519 638 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 LBPP18428 481 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 IL10P22301 178 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 IL12AP29459 219 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 SOX18P35713 384 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 MDH1P40925 334 aaKnown RBP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 TSFMP43897 325 aaKnown RBP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 IDH3AP50213 366 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 CDK9P50750 372 aaKnown RBP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 NCBP2P52298 156 aaKnown RBP eCLIP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 DGKQP52824 942 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 SEC24CP53992 1094 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 CASP9P55211 416 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 NAA20P61599 178 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 UFM1P61960 85 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF33BQ06732 778 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 NFATC3Q12968 1075 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 HSPB3Q12988 150 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 DUSP8Q13202 625 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 KCNAB2Q13303 367 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 PGS1Q32NB8 556 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 NADK2Q4G0N4 442 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF468Q5VIY5 522 aaPredicted RBP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 DESI1Q6ICB0 168 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 OR52E8Q6IFG1 317 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 FAM71E1Q6IPT2 247 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 CGB2Q6NT52 195 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 TCTN3Q6NUS6 607 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 NIPAL1Q6NVV3 410 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 GALNT18Q6P9A2 607 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 LARP4Q71RC2 724 aaKnown RBP eCLIP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 MED25Q71SY5 747 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF551Q7Z340 670 aaPredicted RBP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 SZRD1Q7Z422 152 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 ANKRD46Q86W74 232 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 KBTBD2Q8IY47 623 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 LRRC34Q8IZ02 419 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 PRR22Q8IZ63 422 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 CLECL1Q8IZS7 167 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 GALNT16Q8N428 558 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 TMEM102Q8N9M5 508 aaPredicted RBP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 APCDD1LQ8NCL9 501 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 OR9A2Q8NGT5 310 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 SUN3Q8TAQ9 357 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 FAM76AQ8TAV0 307 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 FBXO30Q8TB52 745 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 RAB3IL1Q8TBN0 382 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 PIWIL2Q8TC59 973 aaKnown RBP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 SLC2A12Q8TD20 617 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF721Q8TF20 911 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 SNRNP27Q8WVK2 155 aaKnown RBP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 SLC39A7Q92504 469 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 PSMF1Q92530 271 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 TANKQ92844 425 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 RIT1Q92963 219 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 PPCDCQ96CD2 204 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 RBM18Q96H35 190 aaKnown RBP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 SENP5Q96HI0 755 aaPredicted RBP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 FCRL1Q96LA6 429 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 TEX37Q96LM6 180 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 PPP3R2Q96LZ3 170 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 MAGEB18Q96M61 343 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 FER1L6-AS2Q96M78 137 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 C7orf26Q96N11 449 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 BBS4Q96RK4 519 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 GAL3ST4Q96RP7 486 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 NPAS2Q99743 824 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 CCT7Q99832 543 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 SLC25A23Q9BV35 468 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 FAIM2Q9BWQ8 316 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 HES7Q9BYE0 225 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 LHPPQ9H008 270 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 FAM107BQ9H098 131 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 CDCP1Q9H5V8 836 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF552Q9H707 407 aaPredicted RBP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 MEAF6Q9HAF1 191 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 CLK4Q9HAZ1 481 aaKnown RBP4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 MYNNQ9NPC7 610 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 MED4Q9NPJ6 270 aa4.29□□□□□ -1.72
CHMP4A-202ENST00000524955 SLAMF7Q9NQ25 335 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms