RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 SCIMPQ6UWF3 145 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 PRICKLE2Q7Z3G6 844 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 CRLF3Q8IUI8 442 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 SAMD14Q8IZD0 417 aaPredicted RBP11.71□□□□□ -0.53
VEGFA-225ENST00000523950 OR4K14Q8NGD5 310 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 OR1N1Q8NGS0 311 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 RAB3IL1Q8TBN0 382 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 PTPMT1Q8WUK0 201 aaPredicted RBP11.71□□□□□ -0.53
VEGFA-225ENST00000523950 TWIST2Q8WVJ9 160 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 NCLNQ969V3 563 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 DEFB126Q9BYW3 111 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 ILKAPQ9H0C8 392 aaPredicted RBP11.71□□□□□ -0.53
VEGFA-225ENST00000523950 ZBTB20Q9HC78 741 aaPredicted RBP11.71□□□□□ -0.53
VEGFA-225ENST00000523950 SLAMF7Q9NQ25 335 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.71□□□□□ -0.535e-7■■□□□ 11.5
VEGFA-225ENST00000523950 C1orf109Q9NX04 203 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 NKIRAS1Q9NYS0 192 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 STMN3Q9NZ72 180 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 EHD3Q9NZN3 535 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 COPS7AQ9UBW8 275 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 TMED5Q9Y3A6 229 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 CCL27Q9Y4X3 112 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 DNAJC15Q9Y5T4 150 aa11.71□□□□□ -0.53
VEGFA-225ENST00000523950 ATRXP46100 2492 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 TRAV17A0A0B4J275 112 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 TRBV11-1A0A0K0K1C0 115 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 WDR91A4D1P6 747 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 OR5H15A6NDH6 313 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 GLOD5A6NK44 160 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 FCHO1O14526 889 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 PGRMC2O15173 223 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 OR10H2O60403 315 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 DDAH2O95865 285 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 ANXA4P09525 319 aaPredicted RBP11.7□□□□□ -0.54
VEGFA-225ENST00000523950 ABCE1P61221 599 aaKnown RBP11.7□□□□□ -0.54
VEGFA-225ENST00000523950 ID2Q02363 134 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 BTKQ06187 659 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 MPP2Q14168 576 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 ZNF169Q14929 603 aaPredicted RBP11.7□□□□□ -0.54
VEGFA-225ENST00000523950 INAQ16352 499 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 UGT3A2Q3SY77 523 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 RPUSD3Q6P087 351 aaKnown RBP11.7□□□□□ -0.54
VEGFA-225ENST00000523950 HSDL2Q6YN16 418 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 IKBIPQ70UQ0 350 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 RPS19BP1Q86WX3 136 aaKnown RBP11.7□□□□□ -0.54
VEGFA-225ENST00000523950 TRIM42Q8IWZ5 723 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 OR4N5Q8IXE1 308 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 KIF2BQ8N4N8 673 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 ANKRD42Q8N9B4 389 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 OR5L2Q8NGL0 311 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 SUN3Q8TAQ9 357 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 SLC2A12Q8TD20 617 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 C16orf78Q8WTQ4 265 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 FBXL20Q96IG2 436 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 FCRL1Q96LA6 429 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 TUBB1Q9H4B7 451 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 LRTM1Q9HBL6 345 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 HAO1Q9UJM8 370 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 PRDM4Q9UKN5 801 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 CES1P1Q9UKY3 287 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 DLGAP4Q9Y2H0 992 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 FIS1Q9Y3D6 152 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 RAP2CQ9Y3L5 183 aa11.7□□□□□ -0.54
VEGFA-225ENST00000523950 PIEZO2Q9H5I5 2752 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 SEC22BO75396 215 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 WDPCPO95876 746 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 PORP16435 677 aaPredicted RBP11.69□□□□□ -0.54
VEGFA-225ENST00000523950 CSNK2A2P19784 350 aaPredicted RBP11.69□□□□□ -0.54
VEGFA-225ENST00000523950 ARRB2P32121 409 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 SLC1A6P48664 564 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 CD97P48960 835 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 TNFSF10P50591 281 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 XKP51811 444 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 MLF1P58340 268 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 STX3Q13277 289 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 KIAA0040Q15053 153 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 NR6A1Q15406 480 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 C6orf163Q5TEZ5 329 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 FAM219BQ5XKK7 198 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 NOXRED1Q6NXP6 359 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 Q6ZSR9 355 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 DDIASQ8IXT1 998 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 BEST3Q8N1M1 668 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 HORMAD2Q8N7B1 307 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 Q8NA96 180 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 ZNF721Q8TF20 911 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 RIT1Q92963 219 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 SENP5Q96HI0 755 aaPredicted RBP11.69□□□□□ -0.54
VEGFA-225ENST00000523950 ATP6V1G3Q96LB4 118 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 PPP3R2Q96LZ3 170 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 NPAS2Q99743 824 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 SH3GL2Q99962 352 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 PAIP2Q9BPZ3 127 aaKnown RBP11.69□□□□□ -0.54
VEGFA-225ENST00000523950 UTP23Q9BRU9 249 aaKnown RBP11.69□□□□□ -0.54
VEGFA-225ENST00000523950 MFRPQ9BY79 579 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 OR8D2Q9GZM6 311 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 EPN3Q9H201 632 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 CDCP1Q9H5V8 836 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 MYNNQ9NPC7 610 aa11.69□□□□□ -0.54
VEGFA-225ENST00000523950 ZDHHC2Q9UIJ5 367 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms