RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 CNOT11Q9UKZ1 510 aaKnown RBP20.88■□□□□ 0.93
PVT1-218ENST00000523328 TUBAL3A6NHL2 446 aa20.87■□□□□ 0.93
PVT1-218ENST00000523328 LRATO95237 230 aa20.87■□□□□ 0.93
PVT1-218ENST00000523328 EPORP19235 508 aa20.87■□□□□ 0.93
PVT1-218ENST00000523328 HIST1H1TP22492 207 aaPredicted RBP20.87■□□□□ 0.93
PVT1-218ENST00000523328 CPN2P22792 545 aa20.87■□□□□ 0.93
PVT1-218ENST00000523328 KRTAP1-3Q8IUG1 177 aa20.87■□□□□ 0.93
PVT1-218ENST00000523328 DND1Q8IYX4 353 aaKnown RBP20.87■□□□□ 0.93
PVT1-218ENST00000523328 TCAIMQ8N3R3 496 aa20.87■□□□□ 0.93
PVT1-218ENST00000523328 BBOF1Q8ND07 529 aa20.87■□□□□ 0.93
PVT1-218ENST00000523328 FAM13CQ8NE31 585 aa20.87■□□□□ 0.93
PVT1-218ENST00000523328 C7orf57Q8NEG2 295 aa20.87■□□□□ 0.93
PVT1-218ENST00000523328 ACTRT1Q8TDG2 376 aa20.87■□□□□ 0.93
PVT1-218ENST00000523328 ZNF473Q8WTR7 871 aaKnown RBP20.87■□□□□ 0.93
PVT1-218ENST00000523328 PPWD1Q96BP3 646 aaKnown RBP20.87■□□□□ 0.93
PVT1-218ENST00000523328 FBXL20Q96IG2 436 aa20.87■□□□□ 0.93
PVT1-218ENST00000523328 JSRP1Q96MG2 331 aaPredicted RBP20.87■□□□□ 0.93
PVT1-218ENST00000523328 DGAT2Q96PD7 388 aa20.87■□□□□ 0.93
PVT1-218ENST00000523328 TIMP4Q99727 224 aa20.87■□□□□ 0.93
PVT1-218ENST00000523328 DERL2Q9GZP9 239 aa20.87■□□□□ 0.93
PVT1-218ENST00000523328 SPACA6W5XKT8 324 aa20.87■□□□□ 0.93
PVT1-218ENST00000523328 C15orf38-AP3S2A0A0A6YYH1 394 aa20.86■□□□□ 0.93
PVT1-218ENST00000523328 WISP3O95389 354 aaPredicted RBP20.86■□□□□ 0.93
PVT1-218ENST00000523328 C1QAP02745 245 aa20.86■□□□□ 0.93
PVT1-218ENST00000523328 MSH2P43246 934 aa20.86■□□□□ 0.93
PVT1-218ENST00000523328 HSPA7P48741 367 aa20.86■□□□□ 0.93
PVT1-218ENST00000523328 MGAT5Q09328 741 aa20.86■□□□□ 0.93
PVT1-218ENST00000523328 E2F2Q14209 437 aa20.86■□□□□ 0.93
PVT1-218ENST00000523328 SNX31Q8N9S9 440 aa20.86■□□□□ 0.93
PVT1-218ENST00000523328 LINC01560Q8TB33 94 aa20.86■□□□□ 0.93
PVT1-218ENST00000523328 LRRC39Q96DD0 335 aa20.86■□□□□ 0.93
PVT1-218ENST00000523328 MCMBPQ9BTE3 642 aa20.86■□□□□ 0.93
PVT1-218ENST00000523328 DOHHQ9BU89 302 aa20.86■□□□□ 0.93
PVT1-218ENST00000523328 CNOT10Q9H9A5 744 aaKnown RBP20.86■□□□□ 0.93
PVT1-218ENST00000523328 POPDC3Q9HBV1 291 aa20.86■□□□□ 0.93
PVT1-218ENST00000523328 PPP2R2CQ9Y2T4 447 aa20.86■□□□□ 0.93
PVT1-218ENST00000523328 GOLGA6L10A0A0M3HER8 536 aa20.85■□□□□ 0.93
PVT1-218ENST00000523328 TRIM3O75382 744 aaPredicted RBP20.85■□□□□ 0.93
PVT1-218ENST00000523328 STK16O75716 305 aa20.85■□□□□ 0.93
PVT1-218ENST00000523328 IL2RAP01589 272 aa20.85■□□□□ 0.93
PVT1-218ENST00000523328 GDF1P27539 372 aa20.85■□□□□ 0.93
PVT1-218ENST00000523328 SERPINB3P29508 390 aa20.85■□□□□ 0.93
PVT1-218ENST00000523328 LAPTM5Q13571 262 aa20.85■□□□□ 0.93
PVT1-218ENST00000523328 NTRK2Q16620 822 aa20.85■□□□□ 0.93
PVT1-218ENST00000523328 PDK4Q16654 411 aa20.85■□□□□ 0.93
PVT1-218ENST00000523328 FBXW10Q5XX13 1052 aa20.85■□□□□ 0.93
PVT1-218ENST00000523328 SPATA6LQ8N4H0 392 aa20.85■□□□□ 0.93
PVT1-218ENST00000523328 DOK4Q8TEW6 326 aa20.85■□□□□ 0.93
PVT1-218ENST00000523328 RBM18Q96H35 190 aaKnown RBP20.85■□□□□ 0.93
PVT1-218ENST00000523328 VPS39Q96JC1 886 aa20.85■□□□□ 0.93
PVT1-218ENST00000523328 ART5Q96L15 291 aa20.85■□□□□ 0.93
PVT1-218ENST00000523328 PRDM14Q9GZV8 571 aa20.85■□□□□ 0.93
PVT1-218ENST00000523328 DDX47Q9H0S4 455 aaKnown RBP20.85■□□□□ 0.93
PVT1-218ENST00000523328 MOCS1Q9NZB8 636 aa20.85■□□□□ 0.93
PVT1-218ENST00000523328 MED12Q93074 2177 aa20.85■□□□□ 0.93
PVT1-218ENST00000523328 EXPH5Q8NEV8 1989 aa20.85■□□□□ 0.93
PVT1-218ENST00000523328 SH3BGRLO75368 114 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 INHBBP09529 407 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 PLIN5Q00G26 463 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 CHIT1Q13231 466 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 MORF4L2Q15014 288 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 TBCCQ15814 346 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 AP5B1Q2VPB7 878 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 TMEM35AQ53FP2 167 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 PAGE2BQ5JRK9 111 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 CDKL4Q5MAI5 379 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 NSUN5P2Q63ZY6 315 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 SULT1C3Q6IMI6 304 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 CHSY3Q70JA7 882 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 KIF18BQ86Y91 864 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 ZNF597Q96LX8 424 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 GAL3ST4Q96RP7 486 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 OSBPL9Q96SU4 736 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 EPB41L4BQ9H329 900 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 RHOJQ9H4E5 214 aa20.84■□□□□ 0.93
PVT1-218ENST00000523328 RPF2Q9H7B2 306 aaKnown RBP20.84■□□□□ 0.93
PVT1-218ENST00000523328 RYDENQ9NUL5 291 aaKnown RBP20.84■□□□□ 0.93
PVT1-218ENST00000523328 JMJD1CQ15652 2540 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 ANKRD33BA6NCL7 494 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 DYRK3O43781 588 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 TGFB1P01137 390 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 CASP2P42575 452 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 SSR2P43308 183 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 DCAF7P61962 342 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 HERVK_113P63132 956 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 ERVK-8P63133 956 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 SORDQ00796 357 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 IRF8Q02556 426 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 BIKQ13323 160 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 EBPQ15125 230 aaKnown RBP20.83■□□□□ 0.93
PVT1-218ENST00000523328 HIST2H2ACQ16777 129 aaPredicted RBP20.83■□□□□ 0.93
PVT1-218ENST00000523328 HIST2H2AA3Q6FI13 130 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 GPSM1Q86YR5 675 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 ARSGQ96EG1 525 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 HSPBAP1Q96EW2 488 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 SORBS1Q9BX66 1292 aaKnown RBP20.83■□□□□ 0.93
PVT1-218ENST00000523328 ERVK-6Q9BXR3 956 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 PHACTR1Q9C0D0 580 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 WWTR1Q9GZV5 400 aa20.83■□□□□ 0.93
PVT1-218ENST00000523328 UBQLN3Q9H347 655 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms