RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 FBXO45P0C2W1 286 aa12.44□□□□□ -0.42
SPARC-203ENST00000521327 CD22P20273 847 aa12.44□□□□□ -0.42
SPARC-203ENST00000521327 GDF1P27539 372 aa12.44□□□□□ -0.42
SPARC-203ENST00000521327 SERPINB3P29508 390 aa12.44□□□□□ -0.42
SPARC-203ENST00000521327 TIMP3P35625 211 aa12.44□□□□□ -0.42
SPARC-203ENST00000521327 STT3AP46977 705 aa12.44□□□□□ -0.42
SPARC-203ENST00000521327 FNTAP49354 379 aa12.44□□□□□ -0.42
SPARC-203ENST00000521327 ZNF136P52737 540 aa12.44□□□□□ -0.42
SPARC-203ENST00000521327 AP5B1Q2VPB7 878 aa12.44□□□□□ -0.42
SPARC-203ENST00000521327 ZC3HC1Q86WB0 502 aaKnown RBP12.44□□□□□ -0.42
SPARC-203ENST00000521327 PDIK1LQ8N165 341 aa12.44□□□□□ -0.42
SPARC-203ENST00000521327 SPATA6LQ8N4H0 392 aa12.44□□□□□ -0.42
SPARC-203ENST00000521327 SNX31Q8N9S9 440 aa12.44□□□□□ -0.42
SPARC-203ENST00000521327 SRFBP1Q8NEF9 429 aaKnown RBP12.44□□□□□ -0.42
SPARC-203ENST00000521327 PTCD3Q96EY7 689 aaKnown RBP12.44□□□□□ -0.42
SPARC-203ENST00000521327 GAL3ST4Q96RP7 486 aa12.44□□□□□ -0.42
SPARC-203ENST00000521327 TMEM79Q9BSE2 394 aa12.44□□□□□ -0.42
SPARC-203ENST00000521327 YIPF4Q9BSR8 244 aa12.44□□□□□ -0.42
SPARC-203ENST00000521327 WWOXQ9NZC7 414 aa12.44□□□□□ -0.42
SPARC-203ENST00000521327 IQANK1A0A1B0GTG1 560 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 CLCA1A8K7I4 914 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 SAP18O00422 153 aaKnown RBP12.43□□□□□ -0.42
SPARC-203ENST00000521327 STK16O75716 305 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 ACSL3O95573 720 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 TGFB1P01137 390 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 C1QAP02745 245 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 HIST1H1TP22492 207 aaPredicted RBP12.43□□□□□ -0.42
SPARC-203ENST00000521327 GGT5P36269 586 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 HSPA7P48741 367 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 DCAF7P61962 342 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 NKX6-1P78426 367 aaPredicted RBP12.43□□□□□ -0.42
SPARC-203ENST00000521327 IGLV3-21P80748 117 aaPredicted RBP12.43□□□□□ -0.42
SPARC-203ENST00000521327 CRYZQ08257 329 aaKnown RBP12.43□□□□□ -0.42
SPARC-203ENST00000521327 POU4F3Q15319 338 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 PCBP2Q15366 365 aaKnown RBP eCLIP12.43□□□□□ -0.42
SPARC-203ENST00000521327 HIST2H2ACQ16777 129 aaPredicted RBP12.43□□□□□ -0.42
SPARC-203ENST00000521327 HIST2H2AA3Q6FI13 130 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 DND1Q8IYX4 353 aaKnown RBP12.43□□□□□ -0.42
SPARC-203ENST00000521327 C7orf57Q8NEG2 295 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 DIO2Q92813 273 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 WDR34Q96EX3 536 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 FBXL20Q96IG2 436 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 VPS39Q96JC1 886 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 ART5Q96L15 291 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 KRT12Q99456 494 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 WDR83Q9BRX9 315 aaKnown RBP12.43□□□□□ -0.42
SPARC-203ENST00000521327 EFCAB11Q9BUY7 163 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 MS4A8Q9BY19 250 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 ZNF395Q9H8N7 513 aaPredicted RBP12.43□□□□□ -0.42
SPARC-203ENST00000521327 CNOT10Q9H9A5 744 aaKnown RBP12.43□□□□□ -0.42
SPARC-203ENST00000521327 CNOT11Q9UKZ1 510 aaKnown RBP12.43□□□□□ -0.42
SPARC-203ENST00000521327 CAMK2AQ9UQM7 478 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 SLC6A5Q9Y345 797 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 JRKLQ9Y4A0 524 aa12.43□□□□□ -0.42
SPARC-203ENST00000521327 GOLGA6L10A0A0M3HER8 536 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 EEF1E1-BLOC1S5C9J1V9 151 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 EEF1E1O43324 174 aaKnown RBP12.42□□□□□ -0.42
SPARC-203ENST00000521327 TRIM3O75382 744 aaPredicted RBP12.42□□□□□ -0.42
SPARC-203ENST00000521327 CD53P19397 219 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 SSR2P43308 183 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 PLIN5Q00G26 463 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 IRF8Q02556 426 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 MGAT5Q09328 741 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 CHIT1Q13231 466 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 SLAMF1Q13291 335 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 LAPTM5Q13571 262 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 ZNF267Q14586 743 aaPredicted RBP12.42□□□□□ -0.42
SPARC-203ENST00000521327 SF3B4Q15427 424 aaKnown RBP eCLIP12.42□□□□□ -0.42
SPARC-203ENST00000521327 PDK4Q16654 411 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 TMEM35AQ53FP2 167 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 PAGE2BQ5JRK9 111 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 NSUN5P2Q63ZY6 315 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 STEAP4Q687X5 459 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 TMEM64Q6YI46 380 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 SLC29A4Q7RTT9 530 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 GPSM1Q86YR5 675 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 KRTAP1-3Q8IUG1 177 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 TCAIMQ8N3R3 496 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 BBOF1Q8ND07 529 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 ZNF473Q8WTR7 871 aaKnown RBP12.42□□□□□ -0.42
SPARC-203ENST00000521327 ARSGQ96EG1 525 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 HSPBAP1Q96EW2 488 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 TRIB1Q96RU8 372 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 SORBS1Q9BX66 1292 aaKnown RBP12.42□□□□□ -0.42
SPARC-203ENST00000521327 PHACTR1Q9C0D0 580 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 PRDM14Q9GZV8 571 aa12.42□□□□□ -0.42
SPARC-203ENST00000521327 RPF2Q9H7B2 306 aaKnown RBP12.42□□□□□ -0.42
SPARC-203ENST00000521327 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.42□□□□□ -0.42
SPARC-203ENST00000521327 NSD1Q96L73 2696 aaPredicted RBP12.42□□□□□ -0.42
SPARC-203ENST00000521327 ANKRD33BA6NCL7 494 aa12.41□□□□□ -0.42
SPARC-203ENST00000521327 WASHC1A8K0Z3 465 aa12.41□□□□□ -0.42
SPARC-203ENST00000521327 CCNT2O60583 730 aaKnown RBP12.41□□□□□ -0.42
SPARC-203ENST00000521327 SCELO95171 688 aa12.41□□□□□ -0.42
SPARC-203ENST00000521327 HRGP04196 525 aa12.41□□□□□ -0.42
SPARC-203ENST00000521327 HEXAP06865 529 aa12.41□□□□□ -0.42
SPARC-203ENST00000521327 PCNAP12004 261 aa12.41□□□□□ -0.42
SPARC-203ENST00000521327 ALOX15P16050 662 aaPredicted RBP12.41□□□□□ -0.42
SPARC-203ENST00000521327 EPORP19235 508 aa12.41□□□□□ -0.42
SPARC-203ENST00000521327 CTSSP25774 331 aa12.41□□□□□ -0.42
SPARC-203ENST00000521327 IVDP26440 423 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms