RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ZNF177Q13360 481 aaPredicted RBP3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 PTPRCAPQ14761 206 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 FUT11Q495W5 492 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 KLHL26Q53HC5 615 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 TECRLQ5HYJ1 363 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 ARMC4Q5T2S8 1044 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 CST9LP1Q5W188 147 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 ADAM5Q6NVV9 412 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 SLC27A1Q6PCB7 646 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 TMPRSS11FQ6ZWK6 438 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 IQCHQ86VS3 1027 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 PLD3Q8IV08 490 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 XXYLT1Q8NBI6 393 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 PPFIBP2Q8ND30 876 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 OR2T12Q8NG77 320 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 LRRC8CQ8TDW0 803 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 RNF128Q8TEB7 428 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 SCFD1Q8WVM8 642 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 ATL1Q8WXF7 558 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 SLAMF9Q96A28 289 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 RADILQ96JH8 1075 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 SLC45A3Q96JT2 553 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 SGK494Q96LW2 274 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 PLA2G12AQ9BZM1 189 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 VN1R1Q9GZP7 353 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 CNOT10Q9H9A5 744 aaKnown RBP3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 RPF1Q9H9Y2 349 aaKnown RBP3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 OLFML3Q9NRN5 406 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 NRBP2Q9NSY0 501 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 DPP3Q9NY33 737 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 PTTG2Q9NZH5 202 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 DEC1Q9P2X7 70 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 KMT2CQ8NEZ4 4911 aaKnown RBP3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 RYR3Q15413 4870 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 DCHS2Q6V1P9 2916 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 A0A1B0GUH1 482 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 A0A1W2PPQ1 181 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 HYKKA2RU49 373 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 PTGESO14684 152 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 MAGEC1O60732 1142 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 SHOX2O60902 331 aaPredicted RBP3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 WDPCPO95876 746 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 TSHBP01222 138 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 NR3C1P04150 777 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 APOA4P06727 396 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 OAS2P29728 719 aaKnown RBP3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 NMT1P30419 496 aaKnown RBP3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 SLC6A6P31641 620 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 RAB28P51157 221 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 TPD52P55327 224 aaPredicted RBP3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 PRKCEQ02156 737 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 RBM39Q14498 530 aaKnown RBP3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 CEBPEQ15744 281 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 UPP1Q16831 310 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 VWC2Q2TAL6 325 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 ATF7IP2Q5U623 682 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 EFL1Q7Z2Z2 1120 aaKnown RBP3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 COMMD2Q86X83 199 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 CACUL1Q86Y37 369 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 ERC1Q8IUD2 1116 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 TTC30BQ8N4P2 665 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 KIAA1143Q96AT1 154 aaPredicted RBP3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 TMEM159Q96B96 161 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 ZNF653Q96CK0 615 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 SPDL1Q96EA4 605 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 STAMBPL1Q96FJ0 436 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 SLC47A1Q96FL8 570 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 ZNF354BQ96LW1 612 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 SEPHS2Q99611 448 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 JPH2Q9BR39 696 aaPredicted RBP3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 RSPH9Q9H1X1 276 aaPredicted RBP3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 LINC00597Q9H2U6 94 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 SYNDIG1Q9H7V2 258 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 NLGN3Q9NZ94 848 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 SLC24A2Q9UI40 661 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 EXOC6BQ9Y2D4 811 aa3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 TP53BP1Q12888 1972 aaPredicted RBP3.2□□□□□ -1.9
TOPBP1-208ENST00000511439 STK36Q9NRP7 1315 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 BIRC6Q9NR09 4857 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 IGKV6-21A0A0C4DH24 114 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 A0A1W2PRB8 838 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 A0A1W2PRQ8 180 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 MTMR11A4FU01 709 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 OR6C76A6NM76 312 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 E9PI62 339 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 TRIM77I1YAP6 450 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 TLR4O00206 839 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 MEIS2O14770 477 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 DUX1O43812 170 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 SLCO2B1O94956 709 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 LY6G6DO95868 133 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 IGHV4-34P06331 123 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 CCDC175P0C221 793 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 IGHV4-38-2P0DP08 117 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 GNAZP19086 355 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 ITIH1P19827 911 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 EPHA2P29317 976 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 PCGF2P35227 344 aa3.19□□□□□ -1.9
TOPBP1-208ENST00000511439 RABIFP47224 123 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms