RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 RAD23AP54725 363 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 SRSF5Q13243 272 aaKnown RBP14.07□□□□□ -0.16
PHF3-209ENST00000509330 ZNF630Q2M218 657 aaPredicted RBP14.07□□□□□ -0.16
PHF3-209ENST00000509330 TTC23Q5W5X9 447 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 KCTD8Q6ZWB6 473 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 LZICQ8WZA0 190 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 SLC35G5Q96KT7 338 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 COL21A1Q96P44 957 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 ENTPD4Q9Y227 616 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 HEMK1Q9Y5R4 338 aaPredicted RBP14.07□□□□□ -0.16
PHF3-209ENST00000509330 SMIM31A0A1B0GVY4 71 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 SDC3O75056 442 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 AHRP35869 848 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 MAZP56270 477 aaKnown RBP14.07□□□□□ -0.16
PHF3-209ENST00000509330 YPEL5P62699 121 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 EXOC3L2Q2M3D2 409 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 TMEM35AQ53FP2 167 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 FCRL6Q6DN72 434 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 FIGLAQ6QHK4 219 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 ABI3BPQ7Z7G0 1075 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 PIK3C3Q8NEB9 887 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 FLVCR1-AS1Q8TAF5 88 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 TMEM38AQ9H6F2 299 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 USE1Q9NZ43 259 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 KCNE3Q9Y6H6 103 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 SPTY2D1-AS1A0A0U1RR47 76 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 M0R129 80 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 HOXC4P09017 264 aaPredicted RBP14.07□□□□□ -0.16
PHF3-209ENST00000509330 SLC35G6P0C7Q6 338 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 JUNDP17535 347 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 CLK3P49761 638 aaKnown RBP14.07□□□□□ -0.16
PHF3-209ENST00000509330 PMS2P3Q13401 168 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 SMN1Q16637 294 aaKnown RBP14.07□□□□□ -0.16
PHF3-209ENST00000509330 ADPRMQ3LIE5 342 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 KCTD21Q4G0X4 260 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 REEP3Q6NUK4 255 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 DEF8Q6ZN54 512 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 CLVS1Q8IUQ0 354 aaPredicted RBP14.07□□□□□ -0.16
PHF3-209ENST00000509330 PJA1Q8NG27 643 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 OR5T3Q8NGG3 340 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 SUN3Q8TAQ9 357 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 RNF31Q96EP0 1072 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 FEVQ99581 238 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 SPATA9Q9BWV2 254 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 RBCK1Q9BYM8 510 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 PITHD1Q9GZP4 211 aaPredicted RBP14.07□□□□□ -0.16
PHF3-209ENST00000509330 FBXL21Q9UKT6 434 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 LYVE1Q9Y5Y7 322 aa14.07□□□□□ -0.16
PHF3-209ENST00000509330 TNFRSF10CO14798 259 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 PCDH17O14917 1159 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 HMGN2P05204 90 aaKnown RBP14.06□□□□□ -0.16
PHF3-209ENST00000509330 NR2F1P10589 423 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 PCSK6P29122 969 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 RNF144AP50876 292 aaPredicted RBP14.06□□□□□ -0.16
PHF3-209ENST00000509330 STXBP1P61764 594 aaKnown RBP14.06□□□□□ -0.16
PHF3-209ENST00000509330 HHEXQ03014 270 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 MYBPC3Q14896 1274 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 APLFQ8IW19 511 aaPredicted RBP14.06□□□□□ -0.16
PHF3-209ENST00000509330 TTC29Q8NA56 475 aaPredicted RBP14.06□□□□□ -0.16
PHF3-209ENST00000509330 CHDHQ8NE62 594 aaPredicted RBP14.06□□□□□ -0.16
PHF3-209ENST00000509330 GTPBP3Q969Y2 492 aaKnown RBP14.06□□□□□ -0.16
PHF3-209ENST00000509330 DGCR14Q96DF8 476 aaKnown RBP14.06□□□□□ -0.16
PHF3-209ENST00000509330 KLHDC7BQ96G42 594 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 ANKMY1Q9P2S6 941 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 CDC14AQ9UNH5 594 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 KRBA1A5PL33 1030 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 FAM170BA6NMN3 283 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 TMX2-CTNND1H3BSU7 103 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 MATN1P21941 496 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 RGS1Q08116 209 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 RBBP4Q09028 425 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 NLGN4XQ8N0W4 816 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 SLC5A8Q8N695 610 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 UTP15Q8TED0 518 aaKnown RBP14.06□□□□□ -0.16
PHF3-209ENST00000509330 ZNF300Q96RE9 604 aaPredicted RBP14.06□□□□□ -0.16
PHF3-209ENST00000509330 GSDMCQ9BYG8 508 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 RBM38Q9H0Z9 239 aaKnown RBP14.06□□□□□ -0.16
PHF3-209ENST00000509330 IL21RQ9HBE5 538 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 ADAM29Q9UKF5 820 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 PCOLCE2Q9UKZ9 415 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 GMPPBQ9Y5P6 360 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 HS3ST3A1Q9Y663 406 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 CEPT1Q9Y6K0 416 aa14.06□□□□□ -0.16
PHF3-209ENST00000509330 AGRPO00253 132 aa14.05□□□□□ -0.16
PHF3-209ENST00000509330 PUM1Q14671 1186 aaKnown RBP eCLIP14.05□□□□□ -0.16
PHF3-209ENST00000509330 MAPK11Q15759 364 aa14.05□□□□□ -0.16
PHF3-209ENST00000509330 KDM4DQ6B0I6 523 aa14.05□□□□□ -0.16
PHF3-209ENST00000509330 LAIR2Q6ISS4 152 aa14.05□□□□□ -0.16
PHF3-209ENST00000509330 PARP8Q8N3A8 854 aa14.05□□□□□ -0.16
PHF3-209ENST00000509330 MPP4Q96JB8 637 aa14.05□□□□□ -0.16
PHF3-209ENST00000509330 OR2A5Q96R48 311 aa14.05□□□□□ -0.16
PHF3-209ENST00000509330 NIPSNAP1Q9BPW8 284 aa14.05□□□□□ -0.16
PHF3-209ENST00000509330 PAPOLBQ9NRJ5 636 aaKnown RBP14.05□□□□□ -0.16
PHF3-209ENST00000509330 A0A1W2PPC4 97 aa14.05□□□□□ -0.16
PHF3-209ENST00000509330 LDB3O75112 727 aa14.05□□□□□ -0.16
PHF3-209ENST00000509330 CPN2P22792 545 aa14.05□□□□□ -0.16
PHF3-209ENST00000509330 PCBP3P57721 371 aaKnown RBP14.05□□□□□ -0.16
PHF3-209ENST00000509330 VSX2P58304 361 aaPredicted RBP14.05□□□□□ -0.16
PHF3-209ENST00000509330 RPS15AP62244 130 aaKnown RBP14.05□□□□□ -0.16
PHF3-209ENST00000509330 LAIR1Q6GTX8 287 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms