RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 SPATC1Q76KD6 591 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 GDPD3Q7L5L3 318 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 AMZ2Q86W34 360 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 CACUL1Q86Y37 369 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 MMAAQ8IVH4 418 aaKnown RBP7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 SLC30A8Q8IWU4 369 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 OR8H2Q8N162 312 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 IQCF1Q8N6M8 205 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 TCEANCQ8N8B7 351 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 OR4D11Q8NGI4 311 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 OR5D16Q8NGK9 328 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 SLC7A13Q8TCU3 470 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 APOBEC4Q8WW27 367 aaKnown RBP7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 KLHL6Q8WZ60 621 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 OR5P2Q8WZ92 322 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 OPALINQ96PE5 141 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 TRNT1Q96Q11 434 aaKnown RBP7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 TREX2Q9BQ50 279 aaPredicted RBP7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 ZNF717Q9BY31 904 aaPredicted RBP7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 MVB12BQ9H7P6 319 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 A4GALTQ9NPC4 353 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 TVP23BQ9NYZ1 205 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 MARK1Q9P0L2 795 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 TRPC4Q9UBN4 977 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 KCND3Q9UK17 655 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 MKLN1Q9UL63 735 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 GPR34Q9UPC5 381 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 TSC22D4Q9Y3Q8 395 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 PLXND1Q9Y4D7 1925 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 PNMA8CA0A1B0GUJ8 204 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 HTR3EA5X5Y0 456 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 ARRDC5A6NEK1 342 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 ANTXRLA6NF34 631 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 OTOL1A6NHN0 477 aaPredicted RBP7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 GLOD5A6NK44 160 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 PDZK1P1A8MUH7 402 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 SLC9A3R1O14745 358 aaPredicted RBP7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 KMOO15229 486 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 PPM1DO15297 605 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 CAPN5O15484 640 aaPredicted RBP7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 TLX2O43763 284 aaPredicted RBP7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 PTTG1O95997 202 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 ADAP00813 363 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 SCG5P05408 212 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 CHRM5P08912 532 aaPredicted RBP7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 CSTF2P33240 577 aaKnown RBP eCLIP7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 SLC15A1P46059 708 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 TGM4P49221 684 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 PRKAG1P54619 331 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 MXD1Q05195 221 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 SPHARQ15513 63 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 PAQR6Q6TCH4 344 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 ADCK2Q7Z695 626 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 PDZD3Q86UT5 571 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 AMER3Q8N944 861 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 OR8D1Q8WZ84 308 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 TRIM43Q96BQ3 446 aaPredicted RBP7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 OTUB2Q96DC9 234 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 TMEM80Q96HE8 168 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 LINC00615Q96LM1 132 aaPredicted RBP7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 ZNF354BQ96LW1 612 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 ZNF607Q96SK3 696 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 MACROD1Q9BQ69 325 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 AIF1LQ9BQI0 150 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 LGR4Q9BXB1 951 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 ASPNQ9BXN1 380 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 KCNK12Q9HB15 430 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 SLC25A19Q9HC21 320 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 HHATLQ9HCP6 504 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 DYRK4Q9NR20 520 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 CTPS2Q9NRF8 586 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 SNTG1Q9NSN8 517 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 TEX10Q9NXF1 929 aaPredicted RBP7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 CCDC88CQ9P219 2028 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 DSPPQ9NZW4 1301 aa7.23□□□□□ -1.25
PPARGC1A-204ENST00000506055 MYO7AQ13402 2215 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 LINC00854A0A1B0GVQ3 168 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 M0R3H8 397 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 ASNA1O43681 348 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 SSX4O60224 188 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 TMPRSS11DO60235 418 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 CSO75390 466 aaKnown RBP7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 TIMP1P01033 207 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 PCCBP05166 539 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 NR2F1P10589 423 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 TNFSF8P32971 234 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 GPC1P35052 558 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 PCYT1AP49585 367 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 CCR8P51685 355 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 DEFA1P59665 94 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 DEFA3P59666 94 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 LSM11P83369 360 aaKnown RBP eCLIP7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 ILKQ13418 452 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 LIPKQ5VXJ0 399 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 C19orf48Q6RUI8 117 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 MEX3DQ86XN8 651 aaKnown RBP7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 DCUN1D3Q8IWE4 304 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 CELF2-AS1Q8N7Q2 184 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 SMPDL3AQ92484 453 aa7.22□□□□□ -1.25
PPARGC1A-204ENST00000506055 TMEM203Q969S6 136 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 238.9 ms