RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 ASB3Q9Y575 518 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 INSIG1O15503 277 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 KIAA0513O60268 411 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 SDC3O75056 442 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 NTN1O95631 604 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 TSHBP01222 138 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 VTNP04004 478 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 CSF2P04141 144 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 UGT2B4P06133 528 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 LYNP07948 512 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 GSTA1P08263 222 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 HMBSP08397 361 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 MBL2P11226 248 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 PTPN4P29074 926 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 FEN1P39748 380 aaKnown RBP3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 OR3A2P47893 321 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 PDLIM4P50479 330 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 DSCR9P59020 149 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 NUCB2P80303 420 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 ZMYND11Q15326 602 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 TRIP10Q15642 601 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 DCAF4L1Q3SXM0 396 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 ACCSLQ4AC99 568 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 FAM106AQ4KMX7 169 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 CBLN3Q6UW01 205 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 LEKR1Q6ZMV7 388 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 CACUL1Q86Y37 369 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 CBWD2Q8IUF1 395 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 NAGSQ8N159 534 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 PARP8Q8N3A8 854 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 MAB21L3Q8N8X9 362 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 OR13A1Q8NGR1 328 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 OR13C2Q8NGS9 318 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 OR2T3Q8NH03 318 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 WDR36Q8NI36 951 aaKnown RBP3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 GPR148Q8TDV2 347 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 APOBEC4Q8WW27 367 aaKnown RBP3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 HPSE2Q8WWQ2 592 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 SUSD6Q92537 303 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 NEUROG1Q92886 237 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 OMA1Q96E52 524 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 C10orf90Q96M02 699 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 ZBTB18Q99592 522 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 JPH2Q9BR39 696 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 DCTN5Q9BTE1 182 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 ALG12Q9BV10 488 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 RBM24Q9BX46 236 aaKnown RBP3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 TDRD1Q9BXT4 1180 aaKnown RBP3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 C3orf14Q9HBI5 128 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 UBE2TQ9NPD8 197 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 INTS9Q9NV88 658 aaKnown RBP3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 MED17Q9NVC6 651 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 KLHL8Q9P2G9 620 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 MIOXQ9UGB7 285 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 KIF7Q2M1P5 1343 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 PTPRUQ92729 1446 aa3.43□□□□□ -1.86
TRAPPC13-208ENST00000505553 PTCH1Q13635 1447 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 hCG_38984A0A1B0GV85 526 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 ZSCAN5CA6NGD5 496 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 WASH3PC4AMC7 463 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 PRAC2D3DTV9 90 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 H3BTX0 84 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 CFLARO15519 480 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 PAK4O96013 591 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 CEBPBP17676 345 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 GIFP27352 417 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 PTGER3P43115 390 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 TDO2P48775 406 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 DHPSP49366 369 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 ART1P52961 327 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 PPIAP62937 165 aaKnown RBP3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 POU3F1Q03052 451 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 NFATC2Q13469 925 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 P2RY6Q15077 328 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 PDK3Q15120 406 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 SHROOM1Q2M3G4 852 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 PARP6Q2NL67 630 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 ACSF3Q4G176 576 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 CAPRIN2Q6IMN6 1127 aaKnown RBP3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 WASH2PQ6VEQ5 465 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 DPY19L2P2Q6ZN68 376 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 FOXL2NBQ6ZUU3 175 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 PAQR9Q6ZVX9 377 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 GPBP1Q86WP2 473 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 GRAMD2AQ8IUY3 354 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 DDHD1Q8NEL9 900 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 ZNF397Q8NF99 534 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 OR4C3Q8NH37 302 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 ZNRF4Q8WWF5 429 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 DYRK2Q92630 601 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 PCED1BQ96HM7 432 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 ZNF354BQ96LW1 612 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 VSTM2LQ96N03 204 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 RAB40CQ96S21 281 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 VCX2Q9H322 139 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 POLD4Q9HCU8 107 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 TM9SF3Q9HD45 589 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 NMRK1Q9NWW6 199 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 RDH8Q9NYR8 311 aa3.42□□□□□ -1.86
TRAPPC13-208ENST00000505553 ZNF175Q9Y473 711 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms