RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.1■□□□□ 0.17
LIN54-204ENST00000505397 CCDC190Q86UF4 302 aa16.1■□□□□ 0.17
LIN54-204ENST00000505397 PRM3Q9NNZ6 103 aa16.1■□□□□ 0.17
LIN54-204ENST00000505397 RAB23Q9ULC3 237 aa16.1■□□□□ 0.17
LIN54-204ENST00000505397 IFNW1P05000 195 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 IL3P08700 152 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 SPNP16150 400 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 C5AR1P21730 350 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 GTF2E2P29084 291 aaKnown RBP16.09■□□□□ 0.17
LIN54-204ENST00000505397 ALDH9A1P49189 494 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 LIM2P55344 173 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 TPTEP56180 551 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 MEF2AQ02078 507 aaPredicted RBP16.09■□□□□ 0.17
LIN54-204ENST00000505397 KCNJ8Q15842 424 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 SLC44A2Q8IWA5 706 aaPredicted RBP16.09■□□□□ 0.17
LIN54-204ENST00000505397 NLGN4XQ8N0W4 816 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 NECTIN4Q96NY8 510 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 CXorf36Q9H7Y0 433 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 MKLN1Q9UL63 735 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 PCDHGB6Q9Y5F9 930 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 VEGFDO43915 354 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 KIAA0513O60268 411 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 MED26O95402 600 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 CNR2P34972 360 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 STARD3Q14849 445 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 SSX1Q16384 188 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 SDE2Q6IQ49 451 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 REEP3Q6NUK4 255 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 PTCHD4Q6ZW05 846 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 HDDC3Q8N4P3 179 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 SCAIQ8N9R8 606 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 RSPO3Q9BXY4 272 aaPredicted RBP16.09■□□□□ 0.17
LIN54-204ENST00000505397 TMEM165Q9HC07 324 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 CLN6Q9NWW5 311 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 REV1Q9UBZ9 1251 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 XIRP2A4UGR9 3374 aa16.09■□□□□ 0.17
LIN54-204ENST00000505397 CCRL2O00421 344 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 ARHGAP33O14559 1287 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 HSMCR30P0CW71 290 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 TIMM50Q3ZCQ8 353 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 AGBL4Q5VU57 503 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 ZNF776Q68DI1 518 aaPredicted RBP16.08■□□□□ 0.16
LIN54-204ENST00000505397 MMP21Q8N119 569 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 ZNF740Q8NDX6 193 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 FAM46DQ8NEK8 389 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 SETD7Q8WTS6 366 aaKnown RBP16.08■□□□□ 0.16
LIN54-204ENST00000505397 TRNT1Q96Q11 434 aaKnown RBP16.08■□□□□ 0.16
LIN54-204ENST00000505397 SDHCQ99643 169 aaPredicted RBP16.08■□□□□ 0.16
LIN54-204ENST00000505397 CFL2Q9Y281 166 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 NUMA1Q14980 2115 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 BRWD1Q9NSI6 2320 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 PCCBP05166 539 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 HOXD12P35452 270 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 SNRPGP62308 76 aaKnown RBP16.08■□□□□ 0.16
LIN54-204ENST00000505397 HTR4Q13639 388 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 TSTQ16762 297 aaKnown RBP16.08■□□□□ 0.16
LIN54-204ENST00000505397 ATAD3BQ5T9A4 648 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 SAXO2Q658L1 398 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 UBE2E3Q969T4 207 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 LINC00615Q96LM1 132 aaPredicted RBP16.08■□□□□ 0.16
LIN54-204ENST00000505397 A4GALTQ9NPC4 353 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 RHCGQ9UBD6 479 aa16.08■□□□□ 0.16
LIN54-204ENST00000505397 LSM2Q9Y333 95 aaKnown RBP16.08■□□□□ 0.16
LIN54-204ENST00000505397 A0A075B6Q4 140 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 A0A1W2PP55 124 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 IGLON5A6NGN9 336 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 K7EQS6 105 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 ADAP00813 363 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 ACADLP28330 430 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 BMP8BP34820 402 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 SOAT1P35610 550 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 MED22Q15528 200 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 TMEM201Q5SNT2 666 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 FAM129CQ86XR2 697 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 GANCQ8TET4 914 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 NEURL3Q96EH8 262 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 DHRS1Q96LJ7 313 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 NLNQ9BYT8 704 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 CCDC177Q9NQR7 707 aaPredicted RBP16.07■□□□□ 0.16
LIN54-204ENST00000505397 GPR34Q9UPC5 381 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 TRBV4-1A0A0J9YWV2 114 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 PNMA8CA0A1B0GUJ8 204 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 SNPHO15079 494 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 KMOO15229 486 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 TBX19O60806 448 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 SEMA7AO75326 666 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 GPX5O75715 221 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 TBX6O95947 436 aaPredicted RBP16.07■□□□□ 0.16
LIN54-204ENST00000505397 DNTTP04053 509 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 SOX6P35712 828 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 KIR2DL1P43626 348 aaPredicted RBP16.07■□□□□ 0.16
LIN54-204ENST00000505397 RHAGQ02094 409 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 ILKQ13418 452 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 KRR1Q13601 381 aaKnown RBP16.07■□□□□ 0.16
LIN54-204ENST00000505397 TSTA3Q13630 321 aaPredicted RBP16.07■□□□□ 0.16
LIN54-204ENST00000505397 C2orf27AQ580R0 203 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 DESI1Q6ICB0 168 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 GDPD3Q7L5L3 318 aa16.07■□□□□ 0.16
LIN54-204ENST00000505397 TRMT11Q7Z4G4 463 aaKnown RBP16.07■□□□□ 0.16
LIN54-204ENST00000505397 SLC9B2Q86UD5 537 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms