RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 GPR32O75388 356 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 LRCH4O75427 683 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 AKAP3O75969 853 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 CCNE2O96020 404 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 GPIP06744 558 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 MELTFP08582 738 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ELFN1P0C7U0 828 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SPI1P17947 270 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PSMC3P17980 439 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ACO1P21399 889 aaKnown RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 DRD4P21917 467 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 DNASE1P24855 282 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PAX6P26367 422 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ELK4P28324 431 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 GTF2E2P29084 291 aaKnown RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PCSK6P29122 969 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 UQCRC1P31930 480 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 EPHX2P34913 555 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SRP9P49458 86 aaKnown RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 CHN2P52757 468 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC5A3P53794 718 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 MANFP55145 182 aaKnown RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 CDH8P55286 799 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 TNFRSF9Q07011 255 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SPOCK1Q08629 439 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SCAPQ12770 1279 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 BFSP2Q13515 415 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SNTB1Q13884 538 aaKnown RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 CAMK1Q14012 370 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 KRT81Q14533 505 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ARL6IP1Q15041 203 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 TMED2Q15363 201 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC9A3R2Q15599 337 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 NTRK2Q16620 822 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 GUK1Q16774 197 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 C5orf64Q2M2E5 130 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 NDUFAF6Q330K2 333 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 RFX4Q33E94 735 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 RAB41Q5JT25 222 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 GCNT6Q5T4J0 391 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 RSBN1Q5VWQ0 802 aaPredicted RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PLCXD3Q63HM9 321 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 LRRC66Q68CR7 880 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 Q6ZRM9 215 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 KCTD8Q6ZWB6 473 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 MTSS1LQ765P7 747 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 HAUS6Q7Z4H7 955 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 MYPOPQ86VE0 399 aaPredicted RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SERINC5Q86VE9 423 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 IGFN1Q86VF2 1251 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF410Q86VK4 478 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 CXorf67Q86X51 503 aaPredicted RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 FOXP4Q8IVH2 680 aaPredicted RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 GSPT2Q8IYD1 628 aaKnown RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SVOPLQ8N434 492 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 KIF2BQ8N4N8 673 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 MFSD9Q8NBP5 474 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PLA2G15Q8NCC3 412 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 CCDC54Q8NEL0 328 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 OR4K14Q8NGD5 310 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 OR4A15Q8NGL6 344 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 OR2V1Q8NHB1 315 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ZFP28Q8NHY6 868 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 BPIFB1Q8TDL5 484 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SMPDL3AQ92484 453 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 TMBIM1Q969X1 311 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 C18orf25Q96B23 403 aaPredicted RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PAGE5Q96GU1 130 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 C5orf30Q96GV9 206 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 C14orf144Q96I85 54 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PBKQ96KB5 322 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 TUBB6Q9BUF5 446 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PDCD10Q9BUL8 212 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 C1orf43Q9BWL3 253 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 RTN4RQ9BZR6 473 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ENKD1Q9H0I2 346 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 OR10A2Q9H208 303 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 TRABDQ9H4I3 376 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC32A1Q9H598 525 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ESRP2Q9H6T0 727 aaKnown RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 WDR55Q9H6Y2 383 aaPredicted RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 UGT1A7Q9HAW7 530 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 UGT1A10Q9HAW8 530 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 UGT1A8Q9HAW9 530 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 CPNE5Q9HCH3 593 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PNPOQ9NVS9 261 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ERAP1Q9NZ08 941 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PLA2G3Q9NZ20 509 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 NPAP1Q9NZP6 1156 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 EPHA6Q9UF33 1036 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 CHRNA9Q9UGM1 479 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 NDRG3Q9UGV2 375 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 OPN4Q9UHM6 478 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF221Q9UK13 617 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ING1Q9UK53 422 aaPredicted RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 DAPP1Q9UN19 280 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 GABRQQ9UN88 632 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ST3GAL5Q9UNP4 418 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PRG3Q9Y2Y8 225 aaPredicted RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms