RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 KBTBD12Q3ZCT8 623 aa21.44■■□□□ 1.02
COL27A1-208ENST00000494780 CES4AQ5XG92 561 aa21.44■■□□□ 1.02
COL27A1-208ENST00000494780 RTL6Q6ICC9 239 aa21.44■■□□□ 1.02
COL27A1-208ENST00000494780 GPR180Q86V85 440 aa21.44■■□□□ 1.02
COL27A1-208ENST00000494780 DND1Q8IYX4 353 aaKnown RBP21.44■■□□□ 1.02
COL27A1-208ENST00000494780 ZCCHC7Q8N3Z6 543 aaKnown RBP21.44■■□□□ 1.02
COL27A1-208ENST00000494780 PPM1NQ8N819 430 aa21.44■■□□□ 1.02
COL27A1-208ENST00000494780 HUS1BQ8NHY5 278 aa21.44■■□□□ 1.02
COL27A1-208ENST00000494780 PAQR8Q8TEZ7 354 aa21.44■■□□□ 1.02
COL27A1-208ENST00000494780 PPWD1Q96BP3 646 aaKnown RBP21.44■■□□□ 1.02
COL27A1-208ENST00000494780 SPACA9Q96E40 222 aaPredicted RBP21.44■■□□□ 1.02
COL27A1-208ENST00000494780 FBXL20Q96IG2 436 aa21.44■■□□□ 1.02
COL27A1-208ENST00000494780 SORBS1Q9BX66 1292 aaKnown RBP21.44■■□□□ 1.02
COL27A1-208ENST00000494780 SEMA4BQ9NPR2 832 aaPredicted RBP21.44■■□□□ 1.02
COL27A1-208ENST00000494780 IGSF5Q9NSI5 407 aa21.44■■□□□ 1.02
COL27A1-208ENST00000494780 RAD51CO43502 376 aa21.43■■□□□ 1.02
COL27A1-208ENST00000494780 FAM155BO75949 473 aa21.43■■□□□ 1.02
COL27A1-208ENST00000494780 NADKO95544 446 aaPredicted RBP21.43■■□□□ 1.02
COL27A1-208ENST00000494780 ALOX15P16050 662 aaPredicted RBP21.43■■□□□ 1.02
COL27A1-208ENST00000494780 PIGAP37287 484 aa21.43■■□□□ 1.02
COL27A1-208ENST00000494780 TNFRSF17Q02223 184 aa21.43■■□□□ 1.02
COL27A1-208ENST00000494780 DDX39BQ13838 428 aaKnown RBP21.43■■□□□ 1.02
COL27A1-208ENST00000494780 WLSQ5T9L3 541 aa21.43■■□□□ 1.02
COL27A1-208ENST00000494780 ADGRD1Q6QNK2 874 aa21.43■■□□□ 1.02
COL27A1-208ENST00000494780 LYPD8Q6UX82 237 aa21.43■■□□□ 1.02
COL27A1-208ENST00000494780 ST13P4Q8IZP2 240 aaPredicted RBP21.43■■□□□ 1.02
COL27A1-208ENST00000494780 SPATA4Q8NEY3 305 aa21.43■■□□□ 1.02
COL27A1-208ENST00000494780 MYRIPQ8NFW9 859 aa21.43■■□□□ 1.02
COL27A1-208ENST00000494780 PELOQ9BRX2 385 aaKnown RBP21.43■■□□□ 1.02
COL27A1-208ENST00000494780 TRGV5A0A0B4J1U4 118 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 A0A0G2JNJ9 132 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 PLPP1O14494 284 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 STX2P32856 288 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 BUD31P41223 144 aaPredicted RBP21.42■■□□□ 1.02
COL27A1-208ENST00000494780 CAV1Q03135 178 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 NAB1Q13506 487 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 C1orf185Q5T7R7 199 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 LIPJQ5W064 366 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 DGAT2L6Q6ZPD8 337 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 RNF175Q8N4F7 328 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 TEX9Q8N6V9 391 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 EXO5Q9H790 373 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 ZFP64Q9NPA5 681 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 DMRT3Q9NQL9 472 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 CNIH4Q9P003 139 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 Q9UFV3 132 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 BOKQ9UMX3 212 aaPredicted RBP21.42■■□□□ 1.02
COL27A1-208ENST00000494780 ANGPTL3Q9Y5C1 460 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 PCDHGA11Q9Y5H2 935 aa21.42■■□□□ 1.02
COL27A1-208ENST00000494780 MED13LQ71F56 2210 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 CCDC189A1A4V9 331 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 SYCE1LA8MT33 242 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 FAM47E-STBD1D6RA91 191 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 HRKO00198 91 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 MTHFD2P13995 350 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 GABRA1P14867 456 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 HNRNPH2P55795 449 aaKnown RBP21.41■■□□□ 1.02
COL27A1-208ENST00000494780 KCNJ2P63252 427 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 SPRED3Q2MJR0 410 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 C18orf63Q68DL7 685 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 SLC29A4Q7RTT9 530 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 CCDC91Q7Z6B0 441 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 TMEM200AQ86VY9 491 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 FBXW8Q8N3Y1 598 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 RHEBL1Q8TAI7 183 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 NXNL1Q96CM4 212 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 MTERF1Q99551 399 aaKnown RBP21.41■■□□□ 1.02
COL27A1-208ENST00000494780 CNPPD1Q9BV87 410 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 ZNF703Q9H7S9 590 aaPredicted RBP21.41■■□□□ 1.02
COL27A1-208ENST00000494780 LYARQ9NX58 379 aaKnown RBP21.41■■□□□ 1.02
COL27A1-208ENST00000494780 QPCTLQ9NXS2 382 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 ACOT9Q9Y305 439 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 SPG11Q96JI7 2443 aa21.41■■□□□ 1.02
COL27A1-208ENST00000494780 IQANK1A0A1B0GTG1 560 aa21.4■■□□□ 1.02
COL27A1-208ENST00000494780 PROM1O43490 865 aa21.4■■□□□ 1.02
COL27A1-208ENST00000494780 GPR75O95800 540 aa21.4■■□□□ 1.02
COL27A1-208ENST00000494780 FBXO45P0C2W1 286 aa21.4■■□□□ 1.02
COL27A1-208ENST00000494780 CD1EP15812 388 aa21.4■■□□□ 1.02
COL27A1-208ENST00000494780 ENDOUP21128 410 aaKnown RBP21.4■■□□□ 1.02
COL27A1-208ENST00000494780 PTX3P26022 381 aaPredicted RBP21.4■■□□□ 1.02
COL27A1-208ENST00000494780 SERPINB3P29508 390 aa21.4■■□□□ 1.02
COL27A1-208ENST00000494780 MAGEA4P43358 317 aa21.4■■□□□ 1.02
COL27A1-208ENST00000494780 PLTPP55058 493 aa21.4■■□□□ 1.02
COL27A1-208ENST00000494780 PHEXP78562 749 aa21.4■■□□□ 1.02
COL27A1-208ENST00000494780 MYBPHQ13203 477 aa21.4■■□□□ 1.02
COL27A1-208ENST00000494780 SLC25A35Q3KQZ1 300 aa21.4■■□□□ 1.02
COL27A1-208ENST00000494780 MYLK4Q86YV6 388 aaPredicted RBP21.4■■□□□ 1.02
COL27A1-208ENST00000494780 LRRC25Q8N386 305 aaPredicted RBP21.4■■□□□ 1.02
COL27A1-208ENST00000494780 FBF1Q8TES7 1133 aa21.4■■□□□ 1.02
COL27A1-208ENST00000494780 REPS1Q96D71 796 aa21.4■■□□□ 1.02
COL27A1-208ENST00000494780 ACKR4Q9NPB9 350 aa21.4■■□□□ 1.02
COL27A1-208ENST00000494780 SPRR3Q9UBC9 169 aa21.4■■□□□ 1.02
COL27A1-208ENST00000494780 UTP11Q9Y3A2 253 aaKnown RBP21.4■■□□□ 1.02
COL27A1-208ENST00000494780 PCDHGB3Q9Y5G1 929 aa21.4■■□□□ 1.02
COL27A1-208ENST00000494780 CHCHD2Q9Y6H1 151 aaPredicted RBP21.4■■□□□ 1.02
COL27A1-208ENST00000494780 A0A087X1B8 175 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 H0YIV9 168 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 OR10H2O60403 315 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 RFPL3SP0C7P2 107 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 GALNSP34059 522 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms