RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 MCHR2Q969V1 340 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 CNOT6LQ96LI5 555 aaKnown RBP3.97□□□□□ -1.77
GTF3A-208ENST00000493903 VPS35Q96QK1 796 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 PSKH2Q96QS6 385 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 SECISBP2Q96T21 854 aaKnown RBP3.97□□□□□ -1.77
GTF3A-208ENST00000493903 IL12RB2Q99665 862 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 ALG12Q9BV10 488 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 RAB11FIP5Q9BXF6 653 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 PITPNM3Q9BZ71 974 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 VCX2Q9H322 139 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 RPAP3Q9H6T3 665 aaPredicted RBP3.97□□□□□ -1.77
GTF3A-208ENST00000493903 DBF4Q9UBU7 674 aaPredicted RBP3.97□□□□□ -1.77
GTF3A-208ENST00000493903 ATG4BQ9Y4P1 393 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 RIPK3Q9Y572 518 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 OR1A2Q9Y585 309 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 NSD2O96028 1365 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 SMCHD1A6NHR9 2005 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 C3P01024 1663 aa3.97□□□□□ -1.77
GTF3A-208ENST00000493903 PLCH2O75038 1416 aa3.96□□□□□ -1.77
GTF3A-208ENST00000493903 SCAPERQ9BY12 1400 aa3.96□□□□□ -1.77
GTF3A-208ENST00000493903 ABCA6Q8N139 1617 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 CTAGE15A4D2H0 777 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 RNF222A6NCQ9 220 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 PPEF2O14830 753 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 P2RX6O15547 441 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 EXTL3O43909 919 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 PRKNO60260 465 aaPredicted RBP3.96□□□□□ -1.78
GTF3A-208ENST00000493903 KLHL41O60662 606 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 SURF6O75683 361 aaKnown RBP3.96□□□□□ -1.78
GTF3A-208ENST00000493903 UGT2B4P06133 528 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 IGHV4-38-2P0DP08 117 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 CEBPBP17676 345 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 GLRA1P23415 457 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 PPP2R1AP30153 589 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 TRIM23P36406 574 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 BEX3Q00994 111 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 CCDC6Q16204 474 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 EXT1Q16394 746 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 SHROOM1Q2M3G4 852 aaPredicted RBP3.96□□□□□ -1.78
GTF3A-208ENST00000493903 CCDC57Q2TAC2 916 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 LRIT3Q3SXY7 679 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 LRRC37A5PQ49AS3 106 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 ACSF3Q4G176 576 aaPredicted RBP3.96□□□□□ -1.78
GTF3A-208ENST00000493903 OR4C11Q6IEV9 310 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 ZNF852Q6ZMS4 543 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 CCDC73Q6ZRK6 1079 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 CENPUQ71F23 418 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 ERASQ7Z444 233 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 CTAGE6Q86UF2 777 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 MARVELD2Q8N4S9 558 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 MLKLQ8NB16 471 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 CCDC197Q8NCU1 140 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 ZNF397Q8NF99 534 aaPredicted RBP3.96□□□□□ -1.78
GTF3A-208ENST00000493903 TCP11Q8WWU5 503 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 SUSD6Q92537 303 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 CASP10Q92851 521 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 TPD52L3Q96J77 140 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 C4orf36Q96KX1 117 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 LPAR4Q99677 370 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 EDEM2Q9BV94 578 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 WWP1Q9H0M0 922 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 S100A14Q9HCY8 104 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 SLC52A3Q9NQ40 469 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 TECRQ9NZ01 308 aaKnown RBP3.96□□□□□ -1.78
GTF3A-208ENST00000493903 POLKQ9UBT6 870 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 CHRNA9Q9UGM1 479 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 B9D1Q9UPM9 204 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 CAB39Q9Y376 341 aaPredicted RBP3.96□□□□□ -1.78
GTF3A-208ENST00000493903 NAALAD2Q9Y3Q0 740 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 SPACA6W5XKT8 324 aa3.96□□□□□ -1.78
GTF3A-208ENST00000493903 MED1Q15648 1581 aaPredicted RBP3.96□□□□□ -1.78
GTF3A-208ENST00000493903 AGLP35573 1532 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 CDK13Q14004 1512 aaKnown RBP3.95□□□□□ -1.78
GTF3A-208ENST00000493903 ZNF518AQ6AHZ1 1483 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 SRRM4A7MD48 611 aaKnown RBP3.95□□□□□ -1.78
GTF3A-208ENST00000493903 H3BNX3 289 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 FPGTO14772 594 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 KRT86O43790 486 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 SAP30O75446 220 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 ADCY5O95622 1261 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 FGF19O95750 216 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 EZRP15311 586 aaKnown RBP3.95□□□□□ -1.78
GTF3A-208ENST00000493903 GPX3P22352 226 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 MATKP42679 507 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 NPY2RP49146 381 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 ATP5IP56385 69 aaPredicted RBP3.95□□□□□ -1.78
GTF3A-208ENST00000493903 DCDC1P59894 354 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 HERVK_113P63132 956 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 ERVK-8P63133 956 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 CBX1P83916 185 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 GPR17Q13304 367 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 CUL2Q13617 745 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 KRT81Q14533 505 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 SQLEQ14534 574 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 TRIP10Q15642 601 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 SLC25A53Q5H9E4 307 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 ASPHD2Q6ICH7 369 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 UNQ6126/PRO20091Q6UXV3 157 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 LHFPL4Q7Z7J7 247 aa3.95□□□□□ -1.78
GTF3A-208ENST00000493903 KIRREL3Q8IZU9 778 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms