RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 DSPPQ9NZW4 1301 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 M0R129 80 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 CACNB4O00305 520 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 MPZL2O60487 215 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 PAK4O96013 591 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 ADAP00813 363 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 APODP05090 189 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 CHMP24386 653 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 PKLRP30613 574 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 UGT2B10P36537 528 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 SSR2P43308 183 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 KCNJ5P48544 419 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 TP53BP2Q13625 1128 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 LRIT3Q3SXY7 679 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 C2orf27AQ580R0 203 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 FRMPD2BQ6IN97 320 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 YAF2Q8IY57 180 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 MFSD4AQ8N468 514 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 ZNF675Q8TD23 568 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 RASSF5Q8WWW0 418 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 DHRS1Q96LJ7 313 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 ZNF354BQ96LW1 612 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 ZNF607Q96SK3 696 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 DPH7Q9BTV6 452 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 RAB11FIP5Q9BXF6 653 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 PLA2G2FQ9BZM2 168 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 SERHL2Q9H4I8 314 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 XKR8Q9H6D3 395 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 IMP3Q9NV31 184 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 MS4A12Q9NXJ0 267 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 TMCC3Q9ULS5 477 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 ATG2AQ2TAZ0 1938 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 A0A0G2JN53 185 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 TRBV4-1A0A0J9YWV2 114 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 SH3D21A4FU49 640 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 LRIT2A6NDA9 550 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 EPOPA6NHQ4 379 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 ANHXE9PGG2 379 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 AIREO43918 545 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 SERPIND1P05546 499 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 HNRNPCP07910 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 ADORA3P0DMS8 318 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 TGFBR1P36897 503 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 CLK1P49759 484 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 PSMD7P51665 324 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 ST3GAL4Q11206 333 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 IRF3Q14653 427 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 TBC1D25Q3MII6 688 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 FBXO43Q4G163 708 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 TMEM35AQ53FP2 167 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 TCTN3Q6NUS6 607 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 FAM92BQ6ZTR7 304 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 SLC46A3Q7Z3Q1 461 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 OR2L8Q8NGY9 312 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 KLK6Q92876 244 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 CRELD1Q96HD1 420 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 C17orf62Q9BQA9 187 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 AICDAQ9GZX7 198 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 ANKHQ9HCJ1 492 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 ZSCAN32Q9NX65 697 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 EHD3Q9NZN3 535 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 P2RX2Q9UBL9 471 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 SLC6A14Q9UN76 642 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 KCNK6Q9Y257 313 aa17.04■□□□□ 0.32
PDLIM7-207ENST00000486828 TMEM247A6NEH6 219 aa17.03■□□□□ 0.32
PDLIM7-207ENST00000486828 PPM1DO15297 605 aa17.03■□□□□ 0.32
PDLIM7-207ENST00000486828 LATO43561 262 aa17.03■□□□□ 0.32
PDLIM7-207ENST00000486828 OXSR1O95747 527 aaPredicted RBP17.03■□□□□ 0.32
PDLIM7-207ENST00000486828 TUBA1BP68363 451 aa17.03■□□□□ 0.32
PDLIM7-207ENST00000486828 FOXD4Q12950 439 aaPredicted RBP17.03■□□□□ 0.32
PDLIM7-207ENST00000486828 ZIC1Q15915 447 aa17.03■□□□□ 0.32
PDLIM7-207ENST00000486828 NDUFAF5Q5TEU4 345 aa17.03■□□□□ 0.32
PDLIM7-207ENST00000486828 ZNF793Q6ZN11 406 aa17.03■□□□□ 0.32
PDLIM7-207ENST00000486828 NUDT18Q6ZVK8 323 aa17.03■□□□□ 0.32
PDLIM7-207ENST00000486828 TUBA1AQ71U36 451 aa17.03■□□□□ 0.32
PDLIM7-207ENST00000486828 B3GNT7Q8NFL0 401 aa17.03■□□□□ 0.32
PDLIM7-207ENST00000486828 SLC35G5Q96KT7 338 aa17.03■□□□□ 0.32
PDLIM7-207ENST00000486828 AMDHD1Q96NU7 426 aa17.03■□□□□ 0.32
PDLIM7-207ENST00000486828 DCSTAMPQ9H295 470 aa17.03■□□□□ 0.32
PDLIM7-207ENST00000486828 GLIPR2Q9H4G4 154 aa17.03■□□□□ 0.32
PDLIM7-207ENST00000486828 DNAAF2Q9NVR5 837 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-207ENST00000486828 FAM227AF5H4B4 570 aa17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 KPNA4O00629 521 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 SLC28A2O43868 658 aa17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 SEMA7AO75326 666 aa17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 BMP4P12644 408 aa17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 GADD45AP24522 165 aa17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 ELAVL4P26378 380 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 CNR2P34972 360 aa17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 INAQ16352 499 aa17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 NLGN4XQ8N0W4 816 aa17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 C9orf43Q8TAL5 461 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 FAIM2Q9BWQ8 316 aa17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 C1QTNF2Q9BXJ5 285 aa17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 UCK2Q9BZX2 261 aa17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 BTBD1Q9H0C5 482 aa17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 OR51I1Q9H343 314 aa17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 RMI1Q9H9A7 625 aa17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 SLC35C2Q9NQQ7 365 aa17.02■□□□□ 0.32
PDLIM7-207ENST00000486828 CNOT2Q9NZN8 540 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms