RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 GPR75O95800 540 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 CCL3P10147 92 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 MAGEA5P43359 124 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 ALDH18A1P54886 795 aaKnown RBP10.58□□□□□ -0.72
SCFD1-206ENST00000484733 HNRNPH2P55795 449 aaKnown RBP10.58□□□□□ -0.72
SCFD1-206ENST00000484733 FOLH1Q04609 750 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 CUL3Q13618 768 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 SLC22A10Q63ZE4 541 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 DGAT2L6Q6ZPD8 337 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 OR4N5Q8IXE1 308 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 DMRTC2Q8IXT2 367 aaPredicted RBP10.58□□□□□ -0.72
SCFD1-206ENST00000484733 RPRMLQ8N4K4 120 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 L3MBTL4Q8NA19 623 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 KCTD4Q8WVF5 259 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 ANP32BQ92688 251 aaKnown RBP10.58□□□□□ -0.72
SCFD1-206ENST00000484733 SORBS1Q9BX66 1292 aaKnown RBP10.58□□□□□ -0.72
SCFD1-206ENST00000484733 ZNF717Q9BY31 904 aaPredicted RBP10.58□□□□□ -0.72
SCFD1-206ENST00000484733 DDX31Q9H8H2 851 aaKnown RBP10.58□□□□□ -0.72
SCFD1-206ENST00000484733 QPCTLQ9NXS2 382 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 CNIH4Q9P003 139 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 ASB4Q9Y574 426 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 ANGPTL3Q9Y5C1 460 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 PCDHGB3Q9Y5G1 929 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 TNPO3Q9Y5L0 923 aaKnown RBP10.58□□□□□ -0.72
SCFD1-206ENST00000484733 LIPGQ9Y5X9 500 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.58□□□□□ -0.72
SCFD1-206ENST00000484733 EML6Q6ZMW3 1958 aa10.58□□□□□ -0.72
SCFD1-206ENST00000484733 FOXE1O00358 373 aaPredicted RBP10.57□□□□□ -0.72
SCFD1-206ENST00000484733 SAP18O00422 153 aaKnown RBP10.57□□□□□ -0.72
SCFD1-206ENST00000484733 WDR1O75083 606 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 C2P06681 752 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 FBXO45P0C2W1 286 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 BSGP35613 385 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 BUD31P41223 144 aaPredicted RBP10.57□□□□□ -0.72
SCFD1-206ENST00000484733 PIK3CGP48736 1102 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 DNASE1L1P49184 302 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 ASPHQ12797 758 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 FBXW8Q8N3Y1 598 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 OR5M3Q8NGP4 307 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 SARAFQ96BY9 339 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 TTYH2Q9BSA4 534 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 KCNN3Q9UGI6 736 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 A0A0A6YYD5 115 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 G3V3Y1 287 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 SH3BGRLO75368 114 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 KLHL2O95198 593 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 GLI4P10075 376 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 CASQ1P31415 396 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 MAN2A2P49641 1150 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 RPS13P62277 151 aaKnown RBP10.57□□□□□ -0.72
SCFD1-206ENST00000484733 C18orf63Q68DL7 685 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 RTL6Q6ICC9 239 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 CDH24Q86UP0 819 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 CCDC25Q86WR0 208 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 RNF175Q8N4F7 328 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 WDR20Q8TBZ3 569 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 PPWD1Q96BP3 646 aaKnown RBP10.57□□□□□ -0.72
SCFD1-206ENST00000484733 SPACA9Q96E40 222 aaPredicted RBP10.57□□□□□ -0.72
SCFD1-206ENST00000484733 GPR78Q96P69 363 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 UCK2Q9BZX2 261 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 PROK2Q9HC23 129 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 ACKR4Q9NPB9 350 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 TNFRSF10DQ9UBN6 386 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 FAM215AQ9Y5M1 114 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 OTOGQ6ZRI0 2925 aa10.57□□□□□ -0.72
SCFD1-206ENST00000484733 HMX2A2RU54 273 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 ANKRD33BA6NCL7 494 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 NKX2-6A6NCS4 301 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 FAM47E-STBD1D6RA91 191 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 RIPPLY3P57055 190 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 IRF9Q00978 393 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 GTF2H2Q13888 395 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 TRADDQ15628 312 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 WLSQ5T9L3 541 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 GTF2H2CQ6P1K8 395 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 B3GNT6Q6ZMB0 384 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 SPNS3Q6ZMD2 512 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 SLC29A4Q7RTT9 530 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 CCDC71Q8IV32 467 aaPredicted RBP10.56□□□□□ -0.72
SCFD1-206ENST00000484733 TP53INP1Q96A56 240 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 ACTR8Q9H981 624 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 ZFP64Q9NPA5 681 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 SEMA4BQ9NPR2 832 aaPredicted RBP10.56□□□□□ -0.72
SCFD1-206ENST00000484733 SNX15Q9NRS6 342 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 CNOT11Q9UKZ1 510 aaKnown RBP10.56□□□□□ -0.72
SCFD1-206ENST00000484733 TMCO1Q9UM00 188 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 BOKQ9UMX3 212 aaPredicted RBP10.56□□□□□ -0.72
SCFD1-206ENST00000484733 IKBKGQ9Y6K9 419 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 TRGV5A0A0B4J1U4 118 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 IQANK1A0A1B0GTG1 560 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 ATP6AP2A0A1C7CYW4 349 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 A0A1W2PR48 441 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 FAM90A27PA6NNH2 459 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 HRKO00198 91 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 ATP6AP2O75787 350 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 SEMA3DO95025 777 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 CLPSP04118 112 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 FAM58BPP0C7Q3 252 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 SLC35E2P0CK97 266 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 GFAPP14136 432 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms