RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 SNX20Q7Z614 316 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 DNAJB7Q7Z6W7 309 aaPredicted RBP4.57□□□□□ -1.68
SSBP1-211ENST00000484178 MRPL10Q7Z7H8 261 aaKnown RBP4.57□□□□□ -1.68
SSBP1-211ENST00000484178 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.57□□□□□ -1.68
SSBP1-211ENST00000484178 ADCK1Q86TW2 530 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 P2RY8Q86VZ1 359 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 TRIM69Q86WT6 500 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 CDR2LQ86X02 465 aaPredicted RBP4.57□□□□□ -1.68
SSBP1-211ENST00000484178 FAM72BQ86X60 149 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 GPSM1Q86YR5 675 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 MFSD6LQ8IWD5 586 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 TCAIMQ8N3R3 496 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 C1orf52Q8N6N3 182 aaKnown RBP4.57□□□□□ -1.68
SSBP1-211ENST00000484178 ARL10Q8N8L6 244 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 FNDC5Q8NAU1 212 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 CHDHQ8NE62 594 aaPredicted RBP4.57□□□□□ -1.68
SSBP1-211ENST00000484178 SEMA6DQ8NFY4 1073 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 OR6J1Q8NGC5 347 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 OR6Q1Q8NGQ2 317 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 OR13J1Q8NGT2 312 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 UBTD2Q8WUN7 234 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 SLC13A3Q8WWT9 602 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 TRIB2Q92519 343 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 SNX19Q92543 992 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 PIK3R3Q92569 461 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 MYDGFQ969H8 173 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 TMBIM1Q969X1 311 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 PHF21BQ96EK2 531 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 KTI12Q96EK9 354 aaPredicted RBP4.57□□□□□ -1.68
SSBP1-211ENST00000484178 ZDHHC12Q96GR4 267 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 PCED1BQ96HM7 432 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 ITCHQ96J02 903 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 PPP1R36Q96LQ0 422 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 MUS81Q96NY9 551 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 CTRCQ99895 268 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 HGH1Q9BTY7 390 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 TRAF4Q9BUZ4 470 aaPredicted RBP4.57□□□□□ -1.68
SSBP1-211ENST00000484178 ADGRE3Q9BY15 652 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 SLC39A8Q9C0K1 460 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 ADNPQ9H2P0 1102 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 DUSP21Q9H596 190 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 KAT8Q9H7Z6 458 aaKnown RBP4.57□□□□□ -1.68
SSBP1-211ENST00000484178 BRF2Q9HAW0 419 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 PLCXD1Q9NUJ7 323 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 CCDC59Q9P031 241 aaKnown RBP4.57□□□□□ -1.68
SSBP1-211ENST00000484178 MTRRQ9UBK8 725 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 VPS51Q9UID3 782 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 TRMT6Q9UJA5 497 aaKnown RBP4.57□□□□□ -1.68
SSBP1-211ENST00000484178 NEU3Q9UQ49 428 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 ERVK-11Q9UQG0 969 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 SCML2Q9UQR0 700 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 IFT52Q9Y366 437 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 NME7Q9Y5B8 376 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 PEX16Q9Y5Y5 336 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 WNT6Q9Y6F9 365 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 FNDC1Q4ZHG4 1894 aaPredicted RBP4.57□□□□□ -1.68
SSBP1-211ENST00000484178 COL4A5P29400 1685 aa4.57□□□□□ -1.68
SSBP1-211ENST00000484178 ZNF236Q9UL36 1845 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 SYNJ2BP-COX16A0A087WUM0 186 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 A0A096LPI6 279 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 FAM92AA1XBS5 289 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 C17orf102A2RUQ5 167 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 FAM172BPA6NC97 362 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 MANSC4A6NHS7 340 aaPredicted RBP4.56□□□□□ -1.68
SSBP1-211ENST00000484178 HAS3O00219 553 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 SLC1A7O00341 560 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 AP3D1O14617 1153 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 PPEF2O14830 753 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 BCKDKO14874 412 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 INPPL1O15357 1258 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 AQP9O43315 295 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 RGS10O43665 173 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 LDB2O43679 373 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 PRAMEF11O60813 436 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 JRKO75564 520 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 EPN2O95208 641 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 SNAP29O95721 258 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 MT-CYBP00156 380 aaPredicted RBP4.56□□□□□ -1.68
SSBP1-211ENST00000484178 GLUD1P00367 558 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 CST1P01037 141 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 KRT6AP02538 564 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 KRT6BP04259 564 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 SRPRAP08240 638 aaKnown RBP4.56□□□□□ -1.68
SSBP1-211ENST00000484178 GNAO1P09471 354 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 EBLN1P0CF75 366 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 SMIM10L2AP0DMW4 78 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 SMIM10L2BP0DMW5 78 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 PKMP14618 531 aaKnown RBP4.56□□□□□ -1.68
SSBP1-211ENST00000484178 ZNF182P17025 639 aaPredicted RBP4.56□□□□□ -1.68
SSBP1-211ENST00000484178 DDX5P17844 614 aaKnown RBP4.56□□□□□ -1.68
SSBP1-211ENST00000484178 CHRM3P20309 590 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 EFNA1P20827 205 aaPredicted RBP4.56□□□□□ -1.68
SSBP1-211ENST00000484178 RPS3P23396 243 aaKnown RBP eCLIP4.56□□□□□ -1.684e-7■■□□□ 12.8
SSBP1-211ENST00000484178 GATA3P23771 443 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 PRPH2P23942 346 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 YWHAQP27348 245 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 EPHA8P29322 1005 aaPredicted RBP4.56□□□□□ -1.68
SSBP1-211ENST00000484178 HOXC8P31273 242 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 S100A5P33763 92 aa4.56□□□□□ -1.68
SSBP1-211ENST00000484178 SOX6P35712 828 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms