RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 RNF111Q6ZNA4 994 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 LSM14AQ8ND56 463 aaKnown RBP9.17□□□□□ -0.94
VEGFA-212ENST00000480614 OR4E2Q8NGC2 313 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 OR13C3Q8NGS6 347 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 OR9A4Q8NGU2 314 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 KCNJ13O60928 360 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 LATS1O95835 1130 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 JMJD7P0C870 316 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 EDNRBP24530 442 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 MS4A13Q5J8X5 152 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 C6orf120Q7Z4R8 191 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 BIRC7Q96CA5 298 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 C12orf42Q96LP6 360 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 CD244Q9BZW8 370 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 PCDHGA8Q9Y5G5 932 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 ZNF536O15090 1300 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 USP2O75604 605 aaPredicted RBP9.17□□□□□ -0.94
VEGFA-212ENST00000480614 XRCC1P18887 633 aaPredicted RBP9.17□□□□□ -0.94
VEGFA-212ENST00000480614 MFSD13AQ14CX5 517 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 KIAA0895LQ68EN5 471 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 SLC18B1Q6NT16 456 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 OR14K1Q8NGZ2 314 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 CANT1Q8WVQ1 401 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 ACSS2Q9NR19 701 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 CHRM5P08912 532 aaPredicted RBP9.17□□□□□ -0.94
VEGFA-212ENST00000480614 TIA1P31483 386 aaKnown RBP eCLIP9.17□□□□□ -0.947e-14■■■□□ 17.6
VEGFA-212ENST00000480614 RHDQ02161 417 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 TMEM198Q66K66 360 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 PDSS2Q86YH6 399 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 TICAM1Q8IUC6 712 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 C19orf12Q9NSK7 152 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 GPR37L1O60883 481 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 SLC16A8O95907 504 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 PTPRRQ15256 657 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 ZNF559Q9BR84 538 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 ATG5Q9H1Y0 275 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 GMEB2Q9UKD1 530 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 EEDO75530 441 aaKnown RBP9.17□□□□□ -0.94
VEGFA-212ENST00000480614 HNRNPA0Q13151 305 aaKnown RBP9.17□□□□□ -0.94
VEGFA-212ENST00000480614 SH3D19Q5HYK7 790 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 GPRC6AQ5T6X5 926 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 CDK15Q96Q40 435 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 ZNF701Q9NV72 531 aaPredicted RBP9.17□□□□□ -0.94
VEGFA-212ENST00000480614 NAALAD2Q9Y3Q0 740 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 GLTPD2A6NH11 291 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 MAN2B1O00754 1011 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 GALTP07902 379 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 MAGEA11P43364 429 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 SERINC3Q13530 473 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 Q6ZVU0 165 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 ERN2Q76MJ5 926 aaKnown RBP9.17□□□□□ -0.94
VEGFA-212ENST00000480614 TSPAN33Q86UF1 283 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 IL17RCQ8NAC3 791 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 CTPS2Q9NRF8 586 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 HIF3AQ9Y2N7 669 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 EFCAB7A8K855 629 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 CAPN3P20807 821 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 ZNF169Q14929 603 aaPredicted RBP9.17□□□□□ -0.94
VEGFA-212ENST00000480614 ZNF805Q5CZA5 627 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 LRRC73Q5JTD7 316 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 SLC2A7Q6PXP3 512 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 S100A7AQ86SG5 101 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 GCDHQ92947 438 aaPredicted RBP9.17□□□□□ -0.94
VEGFA-212ENST00000480614 MCHR1Q99705 422 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 BCO2Q9BYV7 579 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 OR8D2Q9GZM6 311 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 TAS2R3Q9NYW6 316 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 VSTM2BA6NLU5 285 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 SFTPBP07988 381 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 CDCA2Q69YH5 1023 aaPredicted RBP9.17□□□□□ -0.94
VEGFA-212ENST00000480614 PXKQ7Z7A4 578 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 Q8N402 240 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 NAT8LQ8N9F0 302 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 GALNT11Q8NCW6 608 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 WDR77Q9BQA1 342 aaPredicted RBP9.17□□□□□ -0.94
VEGFA-212ENST00000480614 TRAV6A0A075B6T7 132 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 SOBPA7XYQ1 873 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 ASPGQ86U10 573 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 COMTD1Q86VU5 262 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 LRCH3Q96II8 777 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 OR51I1Q9H343 314 aa9.17□□□□□ -0.94
VEGFA-212ENST00000480614 SLC22A31A6NKX4 558 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 D6RAR5 112 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 ACTL6BO94805 426 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 HOXA9P31269 272 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 SOWAHAQ2M3V2 549 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 RCBTB1Q8NDN9 531 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 OR5M3Q8NGP4 307 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 PGAM5Q96HS1 289 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 SRRDQ9UH36 339 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 LOC730098B7Z3J9 87 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 CYB5BO43169 146 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 EMC8O43402 210 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 PRKCAP17252 672 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 CD40LGP29965 261 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 MLLT1Q03111 559 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-212ENST00000480614 RSU1Q15404 277 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 UAP1L1Q3KQV9 507 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 KIAA0319Q5VV43 1072 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 RHEBL1Q8TAI7 183 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms