RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 OR52E8Q6IFG1 317 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 B3GNT6Q6ZMB0 384 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 RNF111Q6ZNA4 994 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 C16orf47Q6ZP98 133 aaPredicted RBP13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 TAGAPQ8N103 731 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 KCTD4Q8WVF5 259 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 ATP6V1E2Q96A05 226 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 NXNL1Q96CM4 212 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 SPACA9Q96E40 222 aaPredicted RBP13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 MTERF1Q99551 399 aaKnown RBP13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 SNX15Q9NRS6 342 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 QPCTLQ9NXS2 382 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 PSD3Q9NYI0 1048 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 ACAD8Q9UKU7 415 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 RNF6Q9Y252 685 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 APCP25054 2843 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 A0A096LPK6 155 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 A0A1B0GVC2 190 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 FAM90A27PA6NNH2 459 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 G3V3Y1 287 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 FOXE1O00358 373 aaPredicted RBP13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 PLPP1O14494 284 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 TP53I11O14683 189 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 SEMA3DO95025 777 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 ETHE1O95571 254 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 GPR75O95800 540 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 IGKV3-11P04433 115 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 C2P06681 752 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 RBP1P09455 135 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 GALNSP34059 522 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 PEX19P40855 299 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 MAGEA5P43359 124 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 RPP38P78345 283 aaKnown RBP13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 DLG1Q12959 904 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 GTF2H2Q13888 395 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 SLC10A1Q14973 349 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 ZNF750Q32MQ0 723 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 GXYLT1Q4G148 440 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 HLA-DQA1Q5Y7H0 255 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 GTF2H2CQ6P1K8 395 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 ZNF585AQ6P3V2 769 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 TRILQ7L0X0 811 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 PAGE2Q7Z2X7 111 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 ZNF572Q7Z3I7 529 aaPredicted RBP13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 CDH24Q86UP0 819 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 CENPLQ8N0S6 344 aaPredicted RBP13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 ZNF295-AS1Q8N0V1 137 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 FBXW8Q8N3Y1 598 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 LIX1Q8N485 282 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 TMEM251Q8N6I4 163 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 ACBD4Q8NC06 268 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 OR10Q1Q8NGQ4 319 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 RIT1Q92963 219 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 LRRC46Q96FV0 321 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 GAL3ST4Q96RP7 486 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 SERPINI1Q99574 410 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 TREX2Q9BQ50 279 aaPredicted RBP13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 IPPKQ9H8X2 491 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 AHSPQ9NZD4 102 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 CPSF2Q9P2I0 782 aaKnown RBP13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 ATG4BQ9Y4P1 393 aa13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.35□□□□□ -0.27
SMARCE1-209ENST00000478349 TRGV5A0A0B4J1U4 118 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 MYOCOSA0A1B0GUC4 107 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 ATP6AP2A0A1C7CYW4 349 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 ZNHIT1O43257 154 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 PROM1O43490 865 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 KLK8O60259 260 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 GUCY1B2O75343 617 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 ATP6AP2O75787 350 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 CLDN9O95484 217 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 INHBAP08476 426 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 FAM58BPP0C7Q3 252 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 CCL3P10147 92 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 MTHFD2P13995 350 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 MSX1P28360 303 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 DNASE1L1P49184 302 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 NRG3P56975 720 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 RPS13P62277 151 aaKnown RBP13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 PMPCAQ10713 525 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 SF3B4Q15427 424 aaKnown RBP eCLIP13.34□□□□□ -0.275e-11■■□□□ 13.3
SMARCE1-209ENST00000478349 CDSNQ15517 529 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 CPSF6Q16630 551 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 TSNAXIP1Q2TAA8 658 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 ZNF791Q3KP31 576 aaPredicted RBP13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 TTC19Q6DKK2 380 aaPredicted RBP13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 ZDHHC24Q6UX98 284 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 GOLGA7Q7Z5G4 137 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 OR4N5Q8IXE1 308 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 C9orf40Q8IXQ3 194 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 MARVELD2Q8N4S9 558 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 ZNF321PQ8N8H1 164 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 FAM13CQ8NE31 585 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 PAQR8Q8TEZ7 354 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 SREK1Q8WXA9 508 aaKnown RBP13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 DDX31Q9H8H2 851 aaKnown RBP13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 ZFP64Q9NPA5 681 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 KCNN3Q9UGI6 736 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 PCDHGB3Q9Y5G1 929 aa13.34□□□□□ -0.27
SMARCE1-209ENST00000478349 A0A0A6YYD5 115 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms