RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 ISPDA4D126 451 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 RNF103O00237 685 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 TIMM23O14925 209 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 LSM1O15116 133 aaKnown RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 CACNG3O60359 315 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 LYPLA1O75608 230 aaPredicted RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 SERPINB7O75635 380 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 RNASEH2AO75792 299 aaKnown RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 SULT1C4O75897 302 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 ANXA9O76027 345 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 CLPXO76031 633 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 SRP72O76094 671 aaKnown RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 VAPBO95292 243 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 PIGNO95427 931 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 BCL10O95999 233 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 CGAP01215 116 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 CD4P01730 458 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 CHRNA1P02708 482 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 MBL2P11226 248 aaPredicted RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 STMN1P16949 149 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 PTPN2P17706 415 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 CTPS1P17812 591 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 CDH3P22223 829 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 PAX3P23760 479 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 HOXC8P31273 242 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 GNL1P36915 607 aaPredicted RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 CAPGP40121 348 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 MATKP42679 507 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 TMED10P49755 219 aaKnown RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 ACLYP53396 1101 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 RAB10P61026 200 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 FAM27E3Q08E93 113 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 BST2Q10589 180 aaKnown RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 MYBPHQ13203 477 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 SNTA1Q13424 505 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 ITGA7Q13683 1181 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 BTG3Q14201 252 aaPredicted RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 FASTKQ14296 549 aaKnown RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 C16orf72Q14CZ0 275 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 ARHGEF6Q15052 776 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 TGFBIQ15582 683 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 INAQ16352 499 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 BCL2A1Q16548 175 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 RFX4Q33E94 735 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 DCAF6Q58WW2 860 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 C6orf52Q5T4I8 152 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 TTC23Q5W5X9 447 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 KCTD11Q693B1 232 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 NCBP2-AS2Q69YL0 99 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 SCYL2Q6P3W7 929 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 DCLRE1AQ6PJP8 1040 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 FAM183BPQ6ZVS7 135 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 PID1Q7Z2X4 250 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 BNIPLQ7Z465 357 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 SERINC5Q86VE9 423 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 KCNMB4Q86W47 210 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 CLVS1Q8IUQ0 354 aaPredicted RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 EMC1Q8N766 993 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 OR52E4Q8NGH9 312 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 PPWD1Q96BP3 646 aaKnown RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 C12orf43Q96C57 262 aaKnown RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 RCN3Q96D15 328 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 HDAC11Q96DB2 347 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 PGAP3Q96FM1 320 aaPredicted RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 VPS39Q96JC1 886 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 ZNF641Q96N77 438 aaPredicted RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 TSGA13Q96PP4 275 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 NODALQ96S42 347 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 PSD2Q9BQI7 771 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 NPLQ9BXD5 320 aaPredicted RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 SPRY4Q9C004 299 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 ELOVL4Q9GZR5 314 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 PAIP1Q9H074 479 aaKnown RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 TRPV6Q9H1D0 765 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 GBA3Q9H227 469 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 DHX35Q9H5Z1 703 aaKnown RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 CHODLQ9H9P2 273 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 PARVBQ9HBI1 364 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 POPDC3Q9HBV1 291 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 SDF2L1Q9HCN8 221 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 TRPV5Q9NQA5 729 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 HPS4Q9NQG7 708 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 ENTPD7Q9NQZ7 604 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 AGPAT4Q9NRZ5 378 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 RASSF1Q9NS23 344 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 C20orf96Q9NUD7 363 aaPredicted RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 TBC1D13Q9NVG8 400 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 RHBDL2Q9NX52 303 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 MTMR10Q9NXD2 777 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 SMPD3Q9NY59 655 aaPredicted RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 ADA2Q9NZK5 511 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 HMGXB4Q9UGU5 601 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 CYTH4Q9UIA0 394 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 ZNF639Q9UID6 485 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 TSPAN16Q9UKR8 245 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 UBQLN1Q9UMX0 589 aaKnown RBP4.33□□□□□ -1.72
LMBR1-216ENST00000477983 ERGIC3Q9Y282 383 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 GPR52Q9Y2T5 361 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 RNF11Q9Y3C5 154 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 SNX9Q9Y5X1 595 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms