RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 ZNF480Q8WV37 535 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 RBCK1Q9BYM8 510 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 TMEM245Q9H330 911 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 DUSP21Q9H596 190 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 ANKMY1Q9P2S6 941 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 NEUROG3Q9Y4Z2 214 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 OR1A2Q9Y585 309 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 N6AMT1Q9Y5N5 214 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 CSNK1G3Q9Y6M4 447 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 CLDN24A6NM45 220 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 GYPBP06028 91 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 CDK1P06493 297 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 ZNF8P17098 575 aaPredicted RBP9.29□□□□□ -0.92
CMC1-209ENST00000477739 SOX18P35713 384 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 VIPR2P41587 438 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 SELENOWP63302 87 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 KCNJ10P78508 379 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 TCEAL5Q5H9L2 206 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 OTPQ5XKR4 325 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 Q6ZNB5 142 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 SYT9Q86SS6 491 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 SFTPA1Q8IWL2 248 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 IZUMO1Q8IYV9 350 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 CBARPQ8N350 705 aaPredicted RBP9.29□□□□□ -0.92
CMC1-209ENST00000477739 HORMAD2Q8N7B1 307 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 OR4F15Q8NGB8 312 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 RNFT2Q96EX2 444 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 MED20Q9H944 212 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 HCN4Q9Y3Q4 1203 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 MED12Q93074 2177 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 SAGE2PA6NJ88 616 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 FUT1P19526 365 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 IMPA1P29218 277 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 TIA1P31483 386 aaKnown RBP eCLIP9.29□□□□□ -0.923e-6■■■■□ 20.5
CMC1-209ENST00000477739 GGT2P36268 569 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 IL12RB1P42701 662 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 SMSP52788 366 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 GABARAPL2P60520 117 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 ZNF763Q0D2J5 394 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 QPRTQ15274 297 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 NNATQ16517 81 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 ASTLQ6HA08 431 aaPredicted RBP9.29□□□□□ -0.92
CMC1-209ENST00000477739 ZNF730Q6ZMV8 503 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 OR8H1Q8NGG4 311 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 OR51G2Q8NGK0 314 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 SLC12A9Q9BXP2 914 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 MMP27Q9H306 513 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 FZD3Q9NPG1 666 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 MKLN1Q9UL63 735 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 NDRG4Q9ULP0 352 aaKnown RBP9.29□□□□□ -0.92
CMC1-209ENST00000477739 GTF2A1LQ9UNN4 478 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 PEX16Q9Y5Y5 336 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 A0A1W2PS29 197 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 METTL15A6NJ78 407 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 ARHGEF9O43307 516 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 DYRK3O43781 588 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 SCO1O75880 301 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 SYPP08247 313 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 JUNBP17275 347 aaPredicted RBP9.29□□□□□ -0.92
CMC1-209ENST00000477739 CBLP22681 906 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 NOS3P29474 1203 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 HNMTP50135 292 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 CLCNKAP51800 687 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 OLR1P78380 273 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 SLC3A1Q07837 685 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 SMU1Q2TAY7 513 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 SYT6Q5T7P8 510 aaPredicted RBP9.29□□□□□ -0.92
CMC1-209ENST00000477739 KHDRBS2Q5VWX1 349 aaKnown RBP9.29□□□□□ -0.92
CMC1-209ENST00000477739 ERICH5Q6P6B1 374 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 TRIM46Q7Z4K8 759 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.29□□□□□ -0.92
CMC1-209ENST00000477739 CYB561A3Q8NBI2 242 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 YIPF6Q96EC8 236 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 HHIPL1Q96JK4 782 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 MVB12BQ9H7P6 319 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 CCDC177Q9NQR7 707 aaPredicted RBP9.29□□□□□ -0.92
CMC1-209ENST00000477739 ZNF226Q9NYT6 803 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 MAT2BQ9NZL9 334 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 PATJQ8NI35 1801 aa9.29□□□□□ -0.92
CMC1-209ENST00000477739 ABHD14A-ACY1A0A1B0GW23 586 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 OR52A4PA6NMU1 304 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 SLC16A6O15403 523 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 AKR7A2O43488 359 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 REM1O75628 298 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 IDSP22304 550 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 SOX9P48436 509 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 NCBP2P52298 156 aaKnown RBP eCLIP9.28□□□□□ -0.92
CMC1-209ENST00000477739 CRISP1P54107 249 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 ITGA1P56199 1179 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 HYAL2Q12891 473 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 TMEM31Q5JXX7 168 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 POMZP3Q6PJE2 187 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 ARL9Q6T311 187 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 LAPTM4BQ86VI4 370 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 MARCH9Q86YJ5 346 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 OR10G6Q8NH81 332 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 ADAMTS16Q8TE57 1224 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 IRF7Q92985 503 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 USP7Q93009 1102 aa9.28□□□□□ -0.92
CMC1-209ENST00000477739 TRMT61AQ96FX7 289 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms