RNA–Protein interactions for RNA: ENST00000476905.6

SSX2IP-206, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2

Gene SSX2IP, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-206ENST00000476905 RPF2Q9H7B2 306 aaKnown RBP8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 ZNF395Q9H8N7 513 aaPredicted RBP8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 KCNK13Q9HB14 408 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 MID1IP1Q9NPA3 183 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 ASF1BQ9NVP2 202 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 HECTD1Q9ULT8 2610 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 A0A088AWK7 358 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 TMEM233B4DJY2 109 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 SMAD7O15105 426 aaKnown RBP8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 MLYCDO95822 493 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 CLPSP04118 112 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 ALPPP05187 535 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 ZNF10P21506 573 aaPredicted RBP8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 PTGER1P34995 402 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 CD96P40200 585 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 TSFMP43897 325 aaKnown RBP8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 ZNF33BQ06732 778 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 IFT88Q13099 833 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 EXT1Q16394 746 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 UGT3A2Q3SY77 523 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 KRT71Q3SY84 523 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 TTC19Q6DKK2 380 aaPredicted RBP8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 CLEC6AQ6EIG7 209 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 ZCCHC23Q6ZST2 131 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 ZADH2Q8N4Q0 377 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 SIMC1Q8NDZ2 872 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 B3GNT7Q8NFL0 401 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 RDH11Q8TC12 318 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 THAP3Q8WTV1 239 aaPredicted RBP8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 NCLNQ969V3 563 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 SLC29A3Q9BZD2 475 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 CDCP1Q9H5V8 836 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 HEY2Q9UBP5 337 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 SVILO95425 2214 aa8.38□□□□□ -1.07
SSX2IP-206ENST00000476905 HIVEP3Q5T1R4 2406 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 CLDN4O14493 209 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 EREGO14944 169 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 NEURL1O76050 574 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 WISP1O95388 367 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 IGKV3-11P04433 115 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 HPDP32754 393 aaPredicted RBP8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 PKNOX1P55347 436 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 TUBA3CQ13748 450 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 ELAVL1Q15717 326 aaKnown RBP8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 LIPMQ5VYY2 423 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 SPINK14Q6IE38 97 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 TUBA3EQ6PEY2 450 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 Q6ZSR9 355 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 NUDT13Q86X67 352 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 OR1N1Q8NGS0 311 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 CPT1CQ8TCG5 803 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 ZNF721Q8TF20 911 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 VPS50Q96JG6 964 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 HSH2DQ96JZ2 352 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 CNDP1Q96KN2 507 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 BRF2Q9HAW0 419 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 VPS29Q9UBQ0 182 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 SNX6Q9UNH7 406 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 EXO1Q9UQ84 846 aaKnown RBP8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 UTP20O75691 2785 aaKnown RBP8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 CPAMD8Q8IZJ3 1885 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 ASH1LQ9NR48 2969 aaKnown RBP8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 TCP11X1B4DZS4 312 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 TRIM13O60858 407 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 ULK1O75385 1050 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 GPR75O95800 540 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 CT62P0C5K7 136 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 GRNP28799 593 aaKnown RBP8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 MLF1P58340 268 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 KIAA0040Q15053 153 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 C21orf62-AS1Q17RA5 79 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 CEP85LQ5SZL2 805 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 NDUFAF5Q5TEU4 345 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 RPS19BP1Q86WX3 136 aaKnown RBP8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 HPS6Q86YV9 775 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 MDS2Q8NDY4 140 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 OR2T11Q8NH01 316 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 ADAMTS18Q8TE60 1221 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 CCDC126Q96EE4 140 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 SENP5Q96HI0 755 aaPredicted RBP8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 PKNOX2Q96KN3 472 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 RHOVQ96L33 236 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 C20orf27Q9GZN8 174 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 ADAP2Q9NPF8 381 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 SLAMF7Q9NQ25 335 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 ADAM29Q9UKF5 820 aa8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 SETXQ7Z333 2677 aaKnown RBP8.37□□□□□ -1.07
SSX2IP-206ENST00000476905 USP9YO00507 2555 aaPredicted RBP8.36□□□□□ -1.07
SSX2IP-206ENST00000476905 TRBV11-1A0A0K0K1C0 115 aa8.36□□□□□ -1.07
SSX2IP-206ENST00000476905 C17orf105B2RV13 164 aa8.36□□□□□ -1.07
SSX2IP-206ENST00000476905 ENO1P06733 434 aaKnown RBP8.36□□□□□ -1.07
SSX2IP-206ENST00000476905 BPGMP07738 259 aa8.36□□□□□ -1.07
SSX2IP-206ENST00000476905 DHRS4L1P0CG22 281 aa8.36□□□□□ -1.07
SSX2IP-206ENST00000476905 S1PR1P21453 382 aa8.36□□□□□ -1.07
SSX2IP-206ENST00000476905 STT3AP46977 705 aa8.36□□□□□ -1.07
SSX2IP-206ENST00000476905 NR0B1P51843 470 aaKnown RBP8.36□□□□□ -1.07
SSX2IP-206ENST00000476905 LSM11P83369 360 aaKnown RBP eCLIP8.36□□□□□ -1.07
SSX2IP-206ENST00000476905 MGAT2Q10469 447 aa8.36□□□□□ -1.07
SSX2IP-206ENST00000476905 STX4Q12846 297 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms