RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 TIMM29Q9BSF4 260 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 ACAT2Q9BWD1 397 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 MS4A8Q9BY19 250 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 PRRG3Q9BZD7 231 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 OSGEPL1Q9H4B0 414 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 C1GALT1Q9NS00 363 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 ACSS1Q9NUB1 689 aaPredicted RBP7.6□□□□□ -1.19
SMC4-212ENST00000470240 PAK1IP1Q9NWT1 392 aaPredicted RBP7.6□□□□□ -1.19
SMC4-212ENST00000470240 EHD3Q9NZN3 535 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 CNOT2Q9NZN8 540 aaKnown RBP7.6□□□□□ -1.19
SMC4-212ENST00000470240 THAP10Q9P2Z0 257 aaPredicted RBP7.6□□□□□ -1.19
SMC4-212ENST00000470240 DAPK2Q9UIK4 370 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 SLC13A4Q9UKG4 626 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 ACSL6Q9UKU0 697 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 MGAT4BQ9UQ53 548 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 SH2B3Q9UQQ2 575 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 ENTPD4Q9Y227 616 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 RNF6Q9Y252 685 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 SLC9A8Q9Y2E8 581 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 SH3GLB1Q9Y371 365 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 PCDHGA2Q9Y5H1 932 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 HEMK1Q9Y5R4 338 aaPredicted RBP7.6□□□□□ -1.19
SMC4-212ENST00000470240 HEBP2Q9Y5Z4 205 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 DGKBQ9Y6T7 804 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 MUC22E2RYF6 1773 aaPredicted RBP7.6□□□□□ -1.19
SMC4-212ENST00000470240 LRRK1Q38SD2 2015 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 DOCK6Q96HP0 2047 aa7.6□□□□□ -1.19
SMC4-212ENST00000470240 IRGMA1A4Y4 181 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 OR2A25A4D2G3 310 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 SAGE2PA6NJ88 616 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 SNTNA6NMZ2 147 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 K7ESM1 405 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 PLPP1O14494 284 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 SLC28A2O43868 658 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 AIREO43918 545 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 UGT2B17O75795 530 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 KAT7O95251 611 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 SERPIND1P05546 499 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 BCHEP06276 602 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 CDK1P06493 297 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 INHBBP09529 407 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 CD247P20963 164 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 TPP2P29144 1249 aaPredicted RBP7.59□□□□□ -1.19
SMC4-212ENST00000470240 SOX6P35712 828 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 UGT2B10P36537 528 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 IFNGR2P38484 337 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 MAP2K4P45985 399 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 CLCNKAP51800 687 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 ARFIP1P53367 373 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 PCBP3P57721 371 aaKnown RBP7.59□□□□□ -1.19
SMC4-212ENST00000470240 ABATP80404 500 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 MC1RQ01726 317 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 EEF1A2Q05639 463 aaKnown RBP7.59□□□□□ -1.19
SMC4-212ENST00000470240 DMPKQ09013 629 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 HSPB3Q12988 150 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 GPM6BQ13491 265 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 KRR1Q13601 381 aaKnown RBP7.59□□□□□ -1.19
SMC4-212ENST00000470240 ATP1A4Q13733 1029 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 MLC1Q15049 377 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 CST6Q15828 149 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 CTF1Q16619 201 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 TIGD6Q17RP2 521 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 DCST1Q5T197 706 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 ZNF776Q68DI1 518 aaPredicted RBP7.59□□□□□ -1.19
SMC4-212ENST00000470240 SDE2Q6IQ49 451 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 KIAA1161Q6NSJ0 714 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 NIPAL1Q6NVV3 410 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 TUBA3EQ6PEY2 450 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 TMC5Q6UXY8 1006 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.59□□□□□ -1.19
SMC4-212ENST00000470240 PTCHD4Q6ZW05 846 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 ZNF547Q8IVP9 402 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 DNAJC22Q8N4W6 341 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 SLC15A4Q8N697 577 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 AQP11Q8NBQ7 271 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 FAM46DQ8NEK8 389 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 OR52J3Q8NH60 311 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 MCFD2Q8NI22 146 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 BBS10Q8TAM1 723 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 SFXN5Q8TD22 340 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 CHPT1Q8WUD6 406 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 SGCDQ92629 289 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 EXOSC8Q96B26 276 aaKnown RBP7.59□□□□□ -1.19
SMC4-212ENST00000470240 SH3YL1Q96HL8 342 aaPredicted RBP7.59□□□□□ -1.19
SMC4-212ENST00000470240 C12orf66Q96MD2 445 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 BBS4Q96RK4 519 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 CDCA3Q99618 268 aaPredicted RBP7.59□□□□□ -1.19
SMC4-212ENST00000470240 TEX12Q9BXU0 123 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 MVB12BQ9H7P6 319 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 FBRSQ9HAH7 460 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 TRPV4Q9HBA0 871 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 LTB4R2Q9NPC1 389 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 PRSS16Q9NQE7 514 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 TAAR2Q9P1P5 351 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 SEC14L3Q9UDX4 400 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 PSORS1C1Q9UIG5 152 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 PLAGL1Q9UM63 463 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 ERGIC3Q9Y282 383 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.59□□□□□ -1.19
SMC4-212ENST00000470240 TMEM98Q9Y2Y6 226 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms