RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 DNAJB6O75190 326 aa4.35□□□□□ -1.71
GCFC2-205ENST00000470197 HPRP00739 348 aa4.35□□□□□ -1.71
GCFC2-205ENST00000470197 WT1P19544 449 aaPredicted RBP4.35□□□□□ -1.71
GCFC2-205ENST00000470197 SEC61BP60468 96 aaKnown RBP4.35□□□□□ -1.71
GCFC2-205ENST00000470197 PDE1BQ01064 536 aa4.35□□□□□ -1.71
GCFC2-205ENST00000470197 SP4Q02446 784 aa4.35□□□□□ -1.71
GCFC2-205ENST00000470197 ELFN2Q5R3F8 820 aa4.35□□□□□ -1.71
GCFC2-205ENST00000470197 ARHGEF16Q5VV41 709 aa4.35□□□□□ -1.71
GCFC2-205ENST00000470197 PIWIL4Q7Z3Z4 852 aaKnown RBP4.35□□□□□ -1.71
GCFC2-205ENST00000470197 WASF1Q92558 559 aa4.35□□□□□ -1.71
GCFC2-205ENST00000470197 PIGTQ969N2 578 aa4.35□□□□□ -1.71
GCFC2-205ENST00000470197 PHF21AQ96BD5 680 aa4.35□□□□□ -1.71
GCFC2-205ENST00000470197 CCDC77Q9BR77 488 aa4.35□□□□□ -1.71
GCFC2-205ENST00000470197 CAPS2Q9BXY5 557 aa4.35□□□□□ -1.71
GCFC2-205ENST00000470197 B9D1Q9UPM9 204 aa4.35□□□□□ -1.71
GCFC2-205ENST00000470197 BRCA2P51587 3418 aa4.35□□□□□ -1.71
GCFC2-205ENST00000470197 ZNF716A6NP11 495 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 K7ESM1 405 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 ARPC2O15144 300 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 ZNF735P0CB33 412 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 VAMP7P51809 220 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 HSF1Q00613 529 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 MYBPHQ13203 477 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 SBK1Q52WX2 424 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 PPP6R3Q5H9R7 873 aaPredicted RBP4.34□□□□□ -1.71
GCFC2-205ENST00000470197 NDUFAF5Q5TEU4 345 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 TTC27Q6P3X3 843 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 MISPQ8IVT2 679 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 EID3Q8N140 333 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 ZNF548Q8NEK5 533 aaPredicted RBP4.34□□□□□ -1.71
GCFC2-205ENST00000470197 GLYATL1Q969I3 302 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 NT5C3BQ969T7 300 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 SCMH1Q96GD3 660 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 BCL7BQ9BQE9 202 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 PPANQ9NQ55 473 aaKnown RBP4.34□□□□□ -1.71
GCFC2-205ENST00000470197 PTGDR2Q9Y5Y4 395 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 PRRC2BQ5JSZ5 2229 aaKnown RBP4.34□□□□□ -1.71
GCFC2-205ENST00000470197 NCF1BA6NI72 391 aaPredicted RBP4.34□□□□□ -1.71
GCFC2-205ENST00000470197 NCF1CA8MVU1 366 aaPredicted RBP4.34□□□□□ -1.71
GCFC2-205ENST00000470197 PDXKO00764 312 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 TRIM23P36406 574 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 LIMK2P53671 638 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 EXT1Q16394 746 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 XKR9Q5GH70 373 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 UQCC3Q6UW78 93 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 LHFPL4Q7Z7J7 247 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 TMEM163Q8TC26 289 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 PHYHIPQ92561 330 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 RTP3Q9BQQ7 232 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 NLNQ9BYT8 704 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 NMNAT2Q9BZQ4 307 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 P2RX2Q9UBL9 471 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 SF3B1O75533 1304 aaKnown RBP eCLIP4.34□□□□□ -1.71
GCFC2-205ENST00000470197 ARAP2Q8WZ64 1704 aa4.34□□□□□ -1.71
GCFC2-205ENST00000470197 SMIM35A0A1B0GVV1 85 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 SERTM2A0A1B0GWG4 89 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 FAM47DPA6NHR8 397 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 CASQ2O14958 399 aaPredicted RBP4.34□□□□□ -1.72
GCFC2-205ENST00000470197 NARSO43776 548 aaKnown RBP4.34□□□□□ -1.72
GCFC2-205ENST00000470197 OR6A2O95222 327 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 CLDN14O95500 239 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 CPN1P15169 458 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 TPSB2P20231 275 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 SLC20A2Q08357 652 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 TRDNQ13061 729 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 ELAVL3Q14576 367 aaKnown RBP4.34□□□□□ -1.72
GCFC2-205ENST00000470197 HERC3Q15034 1050 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 TPSAB1Q15661 275 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 Q4G0T1 1027 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 GFRALQ6UXV0 394 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 CEACAM20Q6UY09 585 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 SPRED1Q7Z699 444 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 MAPKAPK5-AS1Q8N8E1 139 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 GIMAP1Q8WWP7 306 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 PIBF1Q8WXW3 757 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 SMG7Q92540 1137 aaKnown RBP4.34□□□□□ -1.72
GCFC2-205ENST00000470197 P3H4Q92791 437 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 SENP5Q96HI0 755 aaPredicted RBP4.34□□□□□ -1.72
GCFC2-205ENST00000470197 TXNDC15Q96J42 360 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 UBAC1Q9BSL1 405 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 UPF3BQ9BZI7 483 aaKnown RBP4.34□□□□□ -1.72
GCFC2-205ENST00000470197 RNF41Q9H4P4 317 aaPredicted RBP4.34□□□□□ -1.72
GCFC2-205ENST00000470197 ACTL8Q9H568 366 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 BAIAP2L1Q9UHR4 511 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 TESMINQ9Y4I5 508 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 ETV7Q9Y603 341 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 SPACA6W5XKT8 324 aa4.34□□□□□ -1.72
GCFC2-205ENST00000470197 PES1O00541 588 aaKnown RBP4.33□□□□□ -1.72
GCFC2-205ENST00000470197 RGS14O43566 566 aa4.33□□□□□ -1.72
GCFC2-205ENST00000470197 NMT2O60551 498 aa4.33□□□□□ -1.72
GCFC2-205ENST00000470197 SYNGR4O95473 234 aa4.33□□□□□ -1.72
GCFC2-205ENST00000470197 EPOP01588 193 aa4.33□□□□□ -1.72
GCFC2-205ENST00000470197 MT-ND1P03886 318 aa4.33□□□□□ -1.72
GCFC2-205ENST00000470197 GOLGA8HP0CJ92 632 aa4.33□□□□□ -1.72
GCFC2-205ENST00000470197 CCNCP24863 283 aa4.33□□□□□ -1.72
GCFC2-205ENST00000470197 MBTD1Q05BQ5 628 aa4.33□□□□□ -1.72
GCFC2-205ENST00000470197 CACNG1Q06432 222 aa4.33□□□□□ -1.72
GCFC2-205ENST00000470197 KEAP1Q14145 624 aa4.33□□□□□ -1.72
GCFC2-205ENST00000470197 RBBP7Q16576 425 aa4.33□□□□□ -1.72
GCFC2-205ENST00000470197 SPATA46Q5T0L3 261 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms