RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 C6orf10Q5SRN2 563 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 IL23RQ5VWK5 629 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 AGTRAPQ6RW13 159 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 DHFR2Q86XF0 187 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 TEX37Q96LM6 180 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 CCDC138Q96M89 665 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 ZBTB18Q99592 522 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 C1orf50Q9BV19 199 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 ACTR8Q9H981 624 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 ZNF490Q9ULM2 529 aaPredicted RBP16.61■□□□□ 0.25
MRPL28-208ENST00000469744 SNX6Q9UNH7 406 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 RNF11Q9Y3C5 154 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 HS3ST3B1Q9Y662 390 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 PTPN13Q12923 2485 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 LRRK2Q5S007 2527 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 VSTM2BA6NLU5 285 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 TTLL8A6PVC2 850 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 SOCS6O14544 535 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 FBLP22087 321 aaKnown RBP16.61■□□□□ 0.25
MRPL28-208ENST00000469744 IL12AP29459 219 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 VWA2Q5GFL6 755 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 LCN8Q6JVE9 175 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 GALNT16Q8N428 558 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 STT3BQ8TCJ2 826 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 TMEM125Q96AQ2 219 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 MACROD1Q9BQ69 325 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 CRB3Q9BUF7 120 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 YIPF2Q9BWQ6 316 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 LRTM1Q9HBL6 345 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 CMTM6Q9NX76 183 aa16.61■□□□□ 0.25
MRPL28-208ENST00000469744 CNOT11Q9UKZ1 510 aaKnown RBP16.61■□□□□ 0.25
MRPL28-208ENST00000469744 MRPS2Q9Y399 296 aaKnown RBP16.61■□□□□ 0.25
MRPL28-208ENST00000469744 SCN3AQ9NY46 2000 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 FEZF1A0PJY2 475 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 RSL1D1O76021 490 aaKnown RBP16.6■□□□□ 0.25
MRPL28-208ENST00000469744 G6PDP11413 515 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 MSX2P35548 267 aaPredicted RBP16.6■□□□□ 0.25
MRPL28-208ENST00000469744 CD97P48960 835 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 OCA2Q04671 838 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 IMPG1Q17R60 797 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 SYT16Q17RD7 645 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 ZXDCQ2QGD7 858 aaPredicted RBP16.6■□□□□ 0.25
MRPL28-208ENST00000469744 RFTN2Q52LD8 501 aaPredicted RBP16.6■□□□□ 0.25
MRPL28-208ENST00000469744 LIPJQ5W064 366 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 KIRREL2Q6UWL6 708 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 TICAM1Q8IUC6 712 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 ARHGEF39Q8N4T4 335 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 RBMXL3Q8N7X1 1067 aaKnown RBP16.6■□□□□ 0.25
MRPL28-208ENST00000469744 FAM156AQ8NDB6 213 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 MIB2Q96AX9 1013 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 PYCR2Q96C36 320 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 SMAD5Q99717 465 aaKnown RBP16.6■□□□□ 0.25
MRPL28-208ENST00000469744 PCDHAC1Q9H158 963 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 C1orf109Q9NX04 203 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 ACTR3BQ9P1U1 418 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 TRPC4Q9UBN4 977 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 ZNF282Q9UDV7 671 aaPredicted RBP16.6■□□□□ 0.25
MRPL28-208ENST00000469744 NXT1Q9UKK6 140 aaKnown RBP16.6■□□□□ 0.25
MRPL28-208ENST00000469744 AP3M1Q9Y2T2 418 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 DTNAQ9Y4J8 743 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 AP4S1Q9Y587 144 aa16.6■□□□□ 0.25
MRPL28-208ENST00000469744 A0A0A6YYC8 382 aaPredicted RBP16.59■□□□□ 0.25
MRPL28-208ENST00000469744 H0YJX3 145 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 I3L1I5 382 aaPredicted RBP16.59■□□□□ 0.25
MRPL28-208ENST00000469744 ZGLP1P0C6A0 271 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 PRPS2P11908 318 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 CDH1P12830 882 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 TCN1P20061 433 aaPredicted RBP16.59■□□□□ 0.25
MRPL28-208ENST00000469744 VARSP26640 1264 aaKnown RBP16.59■□□□□ 0.25
MRPL28-208ENST00000469744 PEX2P28328 305 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 CSNK1G2P78368 415 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 MYBPC3Q14896 1274 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 KIAA0040Q15053 153 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 FXNQ16595 210 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 PRR30Q53SZ7 412 aaPredicted RBP16.59■□□□□ 0.25
MRPL28-208ENST00000469744 PAGE3Q5JUK9 113 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 LPCAT4Q643R3 524 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 JMJD6Q6NYC1 403 aaPredicted RBP16.59■□□□□ 0.25
MRPL28-208ENST00000469744 VN1R4Q7Z5H5 301 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 LAPTM4BQ86VI4 370 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 C17orf64Q86WR6 236 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 AMER3Q8N944 861 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 DNAJB8Q8NHS0 232 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 MIEF2Q96C03 454 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 C8orf44Q96CB5 159 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 MMABQ96EY8 250 aaPredicted RBP16.59■□□□□ 0.25
MRPL28-208ENST00000469744 TMEM184CQ9NVA4 438 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 ARMC1Q9NVT9 282 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 C3orf18Q9UK00 162 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 TMED5Q9Y3A6 229 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 POLR3HQ9Y535 204 aaPredicted RBP16.59■□□□□ 0.25
MRPL28-208ENST00000469744 PCDHGB7Q9Y5F8 929 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 SHANK1Q9Y566 2161 aa16.59■□□□□ 0.25
MRPL28-208ENST00000469744 DOPEY2Q9Y3R5 2298 aa16.58■□□□□ 0.25
MRPL28-208ENST00000469744 CNTRLQ7Z7A1 2325 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 FOXS1O43638 330 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 DPM1O60762 260 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 IGHEP01854 428 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 UQCRBP14927 111 aa16.58■□□□□ 0.24
MRPL28-208ENST00000469744 ITGA3P26006 1051 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms