RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 UBTD2Q8WUN7 234 aa12.79□□□□□ -0.36
RPP40-203ENST00000464646 TANKQ92844 425 aa12.79□□□□□ -0.36
RPP40-203ENST00000464646 PHF21BQ96EK2 531 aa12.79□□□□□ -0.36
RPP40-203ENST00000464646 SGCZQ96LD1 299 aa12.79□□□□□ -0.36
RPP40-203ENST00000464646 TRIM8Q9BZR9 551 aa12.79□□□□□ -0.36
RPP40-203ENST00000464646 IPPKQ9H8X2 491 aa12.79□□□□□ -0.36
RPP40-203ENST00000464646 IL1RL2Q9HB29 575 aa12.79□□□□□ -0.36
RPP40-203ENST00000464646 PNPLA3Q9NST1 481 aa12.79□□□□□ -0.36
RPP40-203ENST00000464646 LYARQ9NX58 379 aaKnown RBP12.79□□□□□ -0.36
RPP40-203ENST00000464646 TUBA8Q9NY65 449 aaPredicted RBP12.79□□□□□ -0.36
RPP40-203ENST00000464646 MTRF1LQ9UGC7 380 aaKnown RBP12.79□□□□□ -0.36
RPP40-203ENST00000464646 ATG4BQ9Y4P1 393 aa12.79□□□□□ -0.36
RPP40-203ENST00000464646 LIPGQ9Y5X9 500 aa12.79□□□□□ -0.36
RPP40-203ENST00000464646 NINQ8N4C6 2090 aa12.79□□□□□ -0.36
RPP40-203ENST00000464646 FIGNL2A6NMB9 653 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 PLPP1O14494 284 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 URI1O94763 535 aaPredicted RBP12.78□□□□□ -0.36
RPP40-203ENST00000464646 LRATO95237 230 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 INHBAP08476 426 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 CHRNB4P30926 498 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 PIK3CBP42338 1070 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 ALDH18A1P54886 795 aaKnown RBP12.78□□□□□ -0.36
RPP40-203ENST00000464646 ETF1P62495 437 aaKnown RBP12.78□□□□□ -0.36
RPP40-203ENST00000464646 CBLBQ13191 982 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 SGO1Q5FBB7 561 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 WLSQ5T9L3 541 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 ACAD11Q709F0 780 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 GOLGA7Q7Z5G4 137 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 C9orf40Q8IXQ3 194 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 ZNF295-AS1Q8N0V1 137 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 LIX1Q8N485 282 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 MARVELD2Q8N4S9 558 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 GOLM1Q8NBJ4 401 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 ZNF592Q92610 1267 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 RIT1Q92963 219 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 CDK15Q96Q40 435 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 LRRC1Q9BTT6 524 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 NOL11Q9H8H0 719 aaKnown RBP12.78□□□□□ -0.36
RPP40-203ENST00000464646 RNF11Q9Y3C5 154 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 TNPO3Q9Y5L0 923 aaKnown RBP12.78□□□□□ -0.36
RPP40-203ENST00000464646 HRH3Q9Y5N1 445 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.78□□□□□ -0.36
RPP40-203ENST00000464646 MYO9AB2RTY4 2548 aa12.78□□□□□ -0.36
RPP40-203ENST00000464646 INTS1Q8N201 2190 aaKnown RBP12.77□□□□□ -0.36
RPP40-203ENST00000464646 POC1B-GALNT4F8VUJ3 575 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 HRKO00198 91 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 BCKDKO14874 412 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 ZNF354AO60765 605 aaPredicted RBP12.77□□□□□ -0.37
RPP40-203ENST00000464646 SMIM24O75264 130 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 EEDO75530 441 aaKnown RBP12.77□□□□□ -0.37
RPP40-203ENST00000464646 KLHL2O95198 593 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 SIX3O95343 332 aaPredicted RBP12.77□□□□□ -0.37
RPP40-203ENST00000464646 ACSL3O95573 720 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 C1QAP02745 245 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 FAM58BPP0C7Q3 252 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 NR2F6P10588 404 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 PIK3R1P27986 724 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 BIKQ13323 160 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 TOMM20Q15388 145 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 PIGGQ5H8A4 983 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 TEX35Q5T0J7 233 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 DGAT2L6Q6ZPD8 337 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 TAOK1Q7L7X3 1001 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 CCDC91Q7Z6B0 441 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 TMEM200AQ86VY9 491 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 NUDT13Q86X67 352 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 CENPLQ8N0S6 344 aaPredicted RBP12.77□□□□□ -0.37
RPP40-203ENST00000464646 PTGR2Q8N8N7 351 aaPredicted RBP12.77□□□□□ -0.37
RPP40-203ENST00000464646 RHEBL1Q8TAI7 183 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 NUBPLQ8TB37 319 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 IFT81Q8WYA0 676 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 SARAFQ96BY9 339 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 SPOCK3Q9BQ16 436 aa12.77□□□□□ -0.37
RPP40-203ENST00000464646 PELOQ9BRX2 385 aaKnown RBP12.77□□□□□ -0.37
RPP40-203ENST00000464646 SEMA4BQ9NPR2 832 aaPredicted RBP12.77□□□□□ -0.37
RPP40-203ENST00000464646 BOKQ9UMX3 212 aaPredicted RBP12.77□□□□□ -0.37
RPP40-203ENST00000464646 PHF3Q92576 2039 aaKnown RBP12.77□□□□□ -0.37
RPP40-203ENST00000464646 TRGV5A0A0B4J1U4 118 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 WASHC1A8K0Z3 465 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 PROM1O43490 865 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 TRAPPC6AO75865 159 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 SCELO95171 688 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 CLDN9O95484 217 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 GPR75O95800 540 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 CELA3AP09093 270 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 MTHFD2P13995 350 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 KRT15P19012 456 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 NT5EP21589 574 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 ACVR2AP27037 513 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 SERPINB3P29508 390 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 TRPC1P48995 793 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 IFT88Q13099 833 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 MYBPHQ13203 477 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 MPEG1Q2M385 716 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 B3GNT6Q6ZMB0 384 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 TRILQ7L0X0 811 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 WDR53Q7Z5U6 358 aaPredicted RBP12.76□□□□□ -0.37
RPP40-203ENST00000464646 ST13P4Q8IZP2 240 aaPredicted RBP12.76□□□□□ -0.37
RPP40-203ENST00000464646 TAGAPQ8N103 731 aa12.76□□□□□ -0.37
RPP40-203ENST00000464646 ZCCHC7Q8N3Z6 543 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms