RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 GNG14A0A1W2PPG7 69 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 CPED1A4D0V7 1026 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 TNFRSF21O75509 655 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 POP7O75817 140 aaKnown RBP9.4□□□□□ -0.9
PTPRD-207ENST00000463477 ATE1O95260 518 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 HTR1AP08908 422 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 PNLIPP16233 465 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 IL7RP16871 459 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 AK4P27144 223 aaPredicted RBP9.4□□□□□ -0.9
PTPRD-207ENST00000463477 PBLDP30039 288 aaPredicted RBP9.4□□□□□ -0.9
PTPRD-207ENST00000463477 GSTM5P46439 218 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 YAP1P46937 504 aaKnown RBP9.4□□□□□ -0.9
PTPRD-207ENST00000463477 DAPP51397 102 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 CLCNKAP51800 687 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 MVDP53602 400 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 KCNJ10P78508 379 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 VLDLRP98155 873 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 INSM1Q01101 510 aaPredicted RBP9.4□□□□□ -0.9
PTPRD-207ENST00000463477 CDK5R2Q13319 367 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 TCEA2Q15560 299 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 NEDD8Q15843 81 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 MEP1AQ16819 746 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 GPR107Q5VW38 600 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 GUSBP11Q6P575 273 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 PDZD3Q86UT5 571 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 TSPYL5Q86VY4 417 aaPredicted RBP9.4□□□□□ -0.9
PTPRD-207ENST00000463477 DCUN1D3Q8IWE4 304 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 SLC30A8Q8IWU4 369 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 IFI44Q8TCB0 444 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 APOL4Q9BPW4 351 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 DOHHQ9BU89 302 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 RHBGQ9H310 441 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 DUSP21Q9H596 190 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 NT5DC2Q9H857 520 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 REEP1Q9H902 201 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 PELI2Q9HAT8 420 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 FANCEQ9HB96 536 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 PLGRKTQ9HBL7 147 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 FAM8A1Q9UBU6 413 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 KLK13Q9UKR3 277 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 NDRG4Q9ULP0 352 aaKnown RBP9.4□□□□□ -0.9
PTPRD-207ENST00000463477 ICKQ9UPZ9 632 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 PCDHGB3Q9Y5G1 929 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 PCYT1BQ9Y5K3 369 aaPredicted RBP9.4□□□□□ -0.9
PTPRD-207ENST00000463477 SNX5Q9Y5X3 404 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 CCDC88CQ9P219 2028 aa9.4□□□□□ -0.9
PTPRD-207ENST00000463477 LRP4O75096 1905 aa9.4□□□□□ -0.91
PTPRD-207ENST00000463477 RP1P56715 2156 aa9.4□□□□□ -0.91
PTPRD-207ENST00000463477 SUV39H1O43463 412 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 B4GAT1O43505 415 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 NUDT21O43809 227 aaKnown RBP9.39□□□□□ -0.91
PTPRD-207ENST00000463477 RPN2P04844 631 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 GLB1P16278 677 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 DDX5P17844 614 aaKnown RBP9.39□□□□□ -0.91
PTPRD-207ENST00000463477 CCNA2P20248 432 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 PCMT1P22061 227 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 PRKACGP22612 351 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 ACTR1BP42025 376 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 CRYBA2P53672 197 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 RAB15P59190 212 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 ACTR1AP61163 376 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 SELENOWP63302 87 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 CSNK2BP67870 215 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 GAB1Q13480 694 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 ZNF385BQ569K4 471 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 CATSPEREQ5SY80 951 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 CDCP2Q5VXM1 449 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 ADNP2Q6IQ32 1131 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 LINC00299Q6ZSB3 139 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 CHST15Q7LFX5 561 aaPredicted RBP9.39□□□□□ -0.91
PTPRD-207ENST00000463477 FAM129CQ86XR2 697 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 KRT78Q8N1N4 520 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 OR4A15Q8NGL6 344 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 WDR48Q8TAF3 677 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 C16orf78Q8WTQ4 265 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 ZDHHC1Q8WTX9 485 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 NODALQ96S42 347 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 ZNF347Q96SE7 839 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 TMEM121BQ9BXQ6 578 aaPredicted RBP9.39□□□□□ -0.91
PTPRD-207ENST00000463477 GABARAPL3Q9BY60 117 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 PCBD2Q9H0N5 130 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 ABCG4Q9H172 646 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 LIN28AQ9H9Z2 209 aaKnown RBP9.39□□□□□ -0.91
PTPRD-207ENST00000463477 CCNB1IP1Q9NPC3 277 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 THSD1Q9NS62 852 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 AHSPQ9NZD4 102 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 PSME2Q9UL46 239 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 FAF1Q9UNN5 650 aaPredicted RBP9.39□□□□□ -0.91
PTPRD-207ENST00000463477 TPRKBQ9Y3C4 175 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 PLEKHM1Q9Y4G2 1056 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 A0A1B0GVG6 124 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 TMEM229AB2RXF0 380 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 ADAMDEC1O15204 470 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 KMOO15229 486 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 KCNJ13O60928 360 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 KLHL18O94889 574 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 KRT75O95678 551 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 ANGPTL1O95841 491 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 MT-CO3P00414 261 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 CXCR2P25025 360 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms