RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 LEKR1Q6ZMV7 388 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 ZNF367Q7RTV3 350 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 SYVN1Q86TM6 617 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 FAM72BQ86X60 149 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 DNAAF5Q86Y56 855 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 ZDHHC17Q8IUH5 632 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 IQCKQ8N0W5 287 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 PARP16Q8N5Y8 322 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 SCCPDHQ8NBX0 429 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 ACBD4Q8NC06 268 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 TMEM116Q8NCL8 245 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 OR10G6Q8NH81 332 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 C9orf72Q96LT7 481 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 ZNF48Q96MX3 618 aaPredicted RBP4.57□□□□□ -1.68
COPS3-204ENST00000462236 ZNF396Q96N95 335 aaPredicted RBP4.57□□□□□ -1.68
COPS3-204ENST00000462236 SF3B5Q9BWJ5 86 aaKnown RBP4.57□□□□□ -1.68
COPS3-204ENST00000462236 RAB6CQ9H0N0 254 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 RBM38Q9H0Z9 239 aaKnown RBP4.57□□□□□ -1.68
COPS3-204ENST00000462236 UCK1Q9HA47 277 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 PHPT1Q9NRX4 125 aaPredicted RBP4.57□□□□□ -1.68
COPS3-204ENST00000462236 CYSLTR2Q9NS75 346 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.57□□□□□ -1.68
COPS3-204ENST00000462236 ABI3Q9P2A4 366 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 ARMCX3Q9UH62 379 aaPredicted RBP4.57□□□□□ -1.68
COPS3-204ENST00000462236 RCOR1Q9UKL0 485 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 PADI1Q9ULC6 663 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 PCYT1BQ9Y5K3 369 aaPredicted RBP4.57□□□□□ -1.68
COPS3-204ENST00000462236 CAPN7Q9Y6W3 813 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 ROS1P08922 2347 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 ABCA1O95477 2261 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 CHD3Q12873 2000 aaKnown RBP4.56□□□□□ -1.68
COPS3-204ENST00000462236 A0A1B0GVL5 298 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 ARGFXA6NJG6 315 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 LIPT2A6NK58 231 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 PRSS44E7EML9 344 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 H3BNX3 289 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 LRRTM2O43300 516 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 SEC31AO94979 1220 aaKnown RBP4.56□□□□□ -1.68
COPS3-204ENST00000462236 IPO7O95373 1038 aaKnown RBP4.56□□□□□ -1.68
COPS3-204ENST00000462236 MT-ND3P03897 115 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 EIF2S1P05198 315 aaKnown RBP4.56□□□□□ -1.68
COPS3-204ENST00000462236 CAPN1P07384 714 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 CBSLP0DN79 551 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 CBSP35520 551 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 ACTR1BP42025 376 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 GNPDA1P46926 289 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 SULT1E1P49888 294 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 YBEYP58557 167 aaPredicted RBP4.56□□□□□ -1.68
COPS3-204ENST00000462236 ACTR1AP61163 376 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 RHOAP61586 193 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 NIPAL4Q0D2K0 466 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 FGFBP1Q14512 234 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 ZNF235Q14590 738 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 SGO1Q5FBB7 561 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 PPP6R3Q5H9R7 873 aaPredicted RBP4.56□□□□□ -1.68
COPS3-204ENST00000462236 ATL3Q6DD88 541 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 Q6ZS92 163 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 Q6ZSV7 163 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 Q6ZTK2 550 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 PRSS42Q7Z5A4 293 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 KCNMB4Q86W47 210 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 FAM131BQ86XD5 332 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 ARHGAP12Q8IWW6 846 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 RYBPQ8N488 228 aaPredicted RBP4.56□□□□□ -1.68
COPS3-204ENST00000462236 CREB3L4Q8TEY5 395 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 UBE2Q2Q8WVN8 375 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 ITLN2Q8WWU7 325 aaPredicted RBP4.56□□□□□ -1.68
COPS3-204ENST00000462236 SHC3Q92529 594 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 NUS1Q96E22 293 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 STAMBPL1Q96FJ0 436 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 DTD2Q96FN9 168 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 CCDC34Q96HJ3 373 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 COX14Q96I36 57 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 TMEM68Q96MH6 324 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 OR2M4Q96R27 311 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 SH3GL2Q99962 352 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 FAM110AQ9BQ89 295 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 CHCHD6Q9BRQ6 235 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 NUF2Q9BZD4 464 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 RAB33BQ9H082 229 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 EPHA6Q9UF33 1036 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 OR12D3Q9UGF7 316 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 FZD10Q9ULW2 581 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 STAP1Q9ULZ2 295 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 HPCAL4Q9UM19 191 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 PPIL1Q9Y3C6 166 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 PAM16Q9Y3D7 125 aa4.56□□□□□ -1.68
COPS3-204ENST00000462236 LSM4Q9Y4Z0 139 aaKnown RBP4.56□□□□□ -1.68
COPS3-204ENST00000462236 ANK2Q01484 3957 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 ANK3Q12955 4377 aaKnown RBP4.55□□□□□ -1.68
COPS3-204ENST00000462236 IGHV4-28A0A0C4DH34 117 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 A0A0G2JNG1 304 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 TRIM49BA6NDI0 452 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 KDM4EB2RXH2 506 aaPredicted RBP4.55□□□□□ -1.68
COPS3-204ENST00000462236 PSMD11O00231 422 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 RGS14O43566 566 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 BUB1O43683 1085 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 ITM2AO43736 263 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 LIASO43766 372 aa4.55□□□□□ -1.68
COPS3-204ENST00000462236 CRYABP02511 175 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms