RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 PTPMT1Q8WUK0 201 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-229ENST00000460826 TSSK3Q96PN8 268 aa13.08□□□□□ -0.32
HDLBP-229ENST00000460826 NUDT9Q9BW91 350 aa13.08□□□□□ -0.32
HDLBP-229ENST00000460826 FAIM2Q9BWQ8 316 aa13.08□□□□□ -0.32
HDLBP-229ENST00000460826 TMED5Q9Y3A6 229 aa13.08□□□□□ -0.32
HDLBP-229ENST00000460826 GOLGA8QA0A0J9YX86 632 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 GOLGA8OA6NCC3 632 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 GOLGA8NF8WBI6 632 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 PDGFAP04085 211 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 DRD2P14416 443 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 DDCP20711 480 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 PIK3R1P27986 724 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 PTGER1P34995 402 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 FEN1P39748 380 aaKnown RBP13.07□□□□□ -0.32
HDLBP-229ENST00000460826 GPR143P51810 404 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 XKP51811 444 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 KCNAB2Q13303 367 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 ELAVL1Q15717 326 aaKnown RBP13.07□□□□□ -0.32
HDLBP-229ENST00000460826 SLC9B1Q4ZJI4 515 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 IL23RQ5VWK5 629 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 PLAG1Q6DJT9 500 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 RGS9BPQ6ZS82 235 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 KBTBD2Q8IY47 623 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 ST13P4Q8IZP2 240 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-229ENST00000460826 TMEM132CQ8N3T6 1108 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 LIX1Q8N485 282 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 KIF2BQ8N4N8 673 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 ARFGAP2Q8N6H7 521 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 ZNF321PQ8N8H1 164 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 M1APQ8TC57 530 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 PIWIL2Q8TC59 973 aaKnown RBP13.07□□□□□ -0.32
HDLBP-229ENST00000460826 BRIX1Q8TDN6 353 aaKnown RBP13.07□□□□□ -0.32
HDLBP-229ENST00000460826 PSMF1Q92530 271 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 GFM2Q969S9 779 aaKnown RBP13.07□□□□□ -0.32
HDLBP-229ENST00000460826 EXOSC8Q96B26 276 aaKnown RBP13.07□□□□□ -0.32
HDLBP-229ENST00000460826 KLHL29Q96CT2 875 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 CNRIP1Q96F85 164 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-229ENST00000460826 ABHD17AQ96GS6 310 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 DGAT2Q96PD7 388 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 BBC3Q96PG8 261 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-229ENST00000460826 LHPPQ9H008 270 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 WDR55Q9H6Y2 383 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-229ENST00000460826 ZNF552Q9H707 407 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-229ENST00000460826 PFDN4Q9NQP4 134 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 ZNF223Q9UK11 482 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-229ENST00000460826 RALYQ9UKM9 306 aaKnown RBP13.07□□□□□ -0.32
HDLBP-229ENST00000460826 UTS2RQ9UKP6 389 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 KALRNO60229 2985 aa13.07□□□□□ -0.32
HDLBP-229ENST00000460826 COL6A6A6NMZ7 2263 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 CFAP46Q8IYW2 2715 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 C17orf105B2RV13 164 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 HRKO00198 91 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 AKAP10O43572 662 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 LRATO95237 230 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 DDAH2O95865 285 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 SLC35E2P0CK97 266 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 CPMP14384 443 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 TNNI3P19429 210 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 EPHA3P29320 983 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 GSTM5P46439 218 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 PLIN5Q00G26 463 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 GUCY1A3Q02108 690 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 EMX2Q04743 252 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 MYBPC3Q14896 1274 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 PTGR1Q14914 329 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 HEPACAMQ14CZ8 416 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 TERF2Q15554 542 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 EXT1Q16394 746 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 ANKRD26P1Q6NSI1 321 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 IKBIPQ70UQ0 350 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 LARP4Q71RC2 724 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDLBP-229ENST00000460826 TICAM1Q8IUC6 712 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 SIRT6Q8N6T7 355 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 APCDD1LQ8NCL9 501 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 OR14A16Q8NHC5 309 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 ELP5Q8TE02 316 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 NUDT8Q8WV74 236 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 NCLNQ969V3 563 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 ZNF681Q96N22 645 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 UBL7Q96S82 380 aaPredicted RBP13.06□□□□□ -0.32
HDLBP-229ENST00000460826 SLC25A23Q9BV35 468 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 SEMA4CQ9C0C4 833 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 MMP25Q9NPA2 562 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 GPR83Q9NYM4 423 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 PPIEQ9UNP9 301 aaKnown RBP13.06□□□□□ -0.32
HDLBP-229ENST00000460826 USH1CQ9Y6N9 552 aa13.06□□□□□ -0.32
HDLBP-229ENST00000460826 SMG1Q96Q15 3661 aaKnown RBP13.05□□□□□ -0.32
HDLBP-229ENST00000460826 SYNDIG1LA6NDD5 238 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 TRPC5OSA6NMA1 111 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 TCP11X1B4DZS4 312 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 SLCO1B7G3V0H7 640 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 MKRN2OSH3BPM6 223 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 CT62P0C5K7 136 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 G6PDP11413 515 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 PORP16435 677 aaPredicted RBP13.05□□□□□ -0.32
HDLBP-229ENST00000460826 LBPP18428 481 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 MAPK1P28482 360 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 SOX18P35713 384 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 SOX11P35716 441 aa13.05□□□□□ -0.32
HDLBP-229ENST00000460826 PGDP52209 483 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms