RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 SPRED3Q2MJR0 410 aa9.59□□□□□ -0.87
HDLBP-227ENST00000458564 HP1BP3Q5SSJ5 553 aaPredicted RBP9.59□□□□□ -0.87
HDLBP-227ENST00000458564 PRAMEF20Q5VT98 475 aa9.59□□□□□ -0.87
HDLBP-227ENST00000458564 POMZP3Q6PJE2 187 aa9.59□□□□□ -0.87
HDLBP-227ENST00000458564 SYDE1Q6ZW31 735 aaPredicted RBP9.59□□□□□ -0.87
HDLBP-227ENST00000458564 MAATS1Q7Z4T9 603 aa9.59□□□□□ -0.87
HDLBP-227ENST00000458564 GPSM1Q86YR5 675 aa9.59□□□□□ -0.87
HDLBP-227ENST00000458564 LACC1Q8IV20 430 aa9.59□□□□□ -0.87
HDLBP-227ENST00000458564 LAS2Q8IYD9 372 aa9.59□□□□□ -0.87
HDLBP-227ENST00000458564 NAXEQ8NCW5 288 aa9.59□□□□□ -0.87
HDLBP-227ENST00000458564 OR10G3Q8NGC4 313 aa9.59□□□□□ -0.87
HDLBP-227ENST00000458564 GOT1L1Q8NHS2 421 aaPredicted RBP9.59□□□□□ -0.87
HDLBP-227ENST00000458564 UBE2E3Q969T4 207 aa9.59□□□□□ -0.87
HDLBP-227ENST00000458564 PWWP2AQ96N64 755 aa9.59□□□□□ -0.87
HDLBP-227ENST00000458564 DGAT2Q96PD7 388 aa9.59□□□□□ -0.87
HDLBP-227ENST00000458564 SLC6A15Q9H2J7 730 aa9.59□□□□□ -0.87
HDLBP-227ENST00000458564 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.59□□□□□ -0.87
HDLBP-227ENST00000458564 MS4A12Q9NXJ0 267 aa9.59□□□□□ -0.87
HDLBP-227ENST00000458564 ALKBH4Q9NXW9 302 aa9.59□□□□□ -0.87
HDLBP-227ENST00000458564 MTRF1LQ9UGC7 380 aaKnown RBP9.59□□□□□ -0.87
HDLBP-227ENST00000458564 PTBP2Q9UKA9 531 aaKnown RBP9.59□□□□□ -0.87
HDLBP-227ENST00000458564 CNOT11Q9UKZ1 510 aaKnown RBP9.59□□□□□ -0.87
HDLBP-227ENST00000458564 SNX12Q9UMY4 172 aa9.59□□□□□ -0.87
HDLBP-227ENST00000458564 IKBKGQ9Y6K9 419 aa9.59□□□□□ -0.87
HDLBP-227ENST00000458564 ARHGAP21Q5T5U3 1957 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 OR6C76A6NM76 312 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 E7ESA3 106 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 HRKO00198 91 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 RTCAO00442 366 aaKnown RBP9.58□□□□□ -0.88
HDLBP-227ENST00000458564 TRIM3O75382 744 aaPredicted RBP9.58□□□□□ -0.88
HDLBP-227ENST00000458564 SEC31AO94979 1220 aaKnown RBP9.58□□□□□ -0.88
HDLBP-227ENST00000458564 C1QAP02745 245 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 RAF1P04049 648 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 BMP5P22003 454 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 CPN2P22792 545 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 SERPINB3P29508 390 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 MSH2P43246 934 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 SSR2P43308 183 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 DGKQP52824 942 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 ARFIP1P53367 373 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 ARL4CP56559 192 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 ATP6V0D1P61421 351 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 SORDQ00796 357 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 TNFRSF17Q02223 184 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 IRF8Q02556 426 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 CRYZQ08257 329 aaKnown RBP9.58□□□□□ -0.88
HDLBP-227ENST00000458564 CHIT1Q13231 466 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 SNTB1Q13884 538 aaKnown RBP9.58□□□□□ -0.88
HDLBP-227ENST00000458564 FASTKD3Q14CZ7 662 aaKnown RBP9.58□□□□□ -0.88
HDLBP-227ENST00000458564 EBPQ15125 230 aaKnown RBP9.58□□□□□ -0.88
HDLBP-227ENST00000458564 HIST2H2ACQ16777 129 aaPredicted RBP9.58□□□□□ -0.88
HDLBP-227ENST00000458564 AP5B1Q2VPB7 878 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 TBCELQ5QJ74 424 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 HIST2H2AA3Q6FI13 130 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 CHSY3Q70JA7 882 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 LRRC70Q7Z2Q7 622 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 BIVMQ86UB2 503 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 ST13P4Q8IZP2 240 aaPredicted RBP9.58□□□□□ -0.88
HDLBP-227ENST00000458564 ZCCHC7Q8N3Z6 543 aaKnown RBP9.58□□□□□ -0.88
HDLBP-227ENST00000458564 LIX1Q8N485 282 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 SNX31Q8N9S9 440 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 TANKQ92844 425 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 RBM18Q96H35 190 aaKnown RBP9.58□□□□□ -0.88
HDLBP-227ENST00000458564 ZNF597Q96LX8 424 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 PELOQ9BRX2 385 aaKnown RBP9.58□□□□□ -0.88
HDLBP-227ENST00000458564 DOHHQ9BU89 302 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 PHACTR1Q9C0D0 580 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 WWTR1Q9GZV5 400 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 PRDM14Q9GZV8 571 aa9.58□□□□□ -0.88
HDLBP-227ENST00000458564 GSX1Q9H4S2 264 aaPredicted RBP9.58□□□□□ -0.88
HDLBP-227ENST00000458564 RPF2Q9H7B2 306 aaKnown RBP9.58□□□□□ -0.88
HDLBP-227ENST00000458564 ATE1O95260 518 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 CCDC166P0CW27 439 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 EPXP11678 715 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 CD1DP15813 335 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 ALOX15P16050 662 aaPredicted RBP9.57□□□□□ -0.88
HDLBP-227ENST00000458564 TACR1P25103 407 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 GALNSP34059 522 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 ZNF136P52737 540 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 SLC12A2P55011 1212 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 SLC37A1P57057 533 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 DUSP8Q13202 625 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 RPS6KA2Q15349 733 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 SF3B4Q15427 424 aaKnown RBP eCLIP9.57□□□□□ -0.88
HDLBP-227ENST00000458564 OR4D1Q15615 310 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 ZKSCAN8Q15776 578 aaPredicted RBP9.57□□□□□ -0.88
HDLBP-227ENST00000458564 DEFB113Q30KQ7 82 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 FBXO48Q5FWF7 155 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 NHSL2Q5HYW2 709 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 DEPDC1Q5TB30 811 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 KHDRBS2Q5VWX1 349 aaKnown RBP9.57□□□□□ -0.88
HDLBP-227ENST00000458564 NSUN5P2Q63ZY6 315 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 MED27Q6P2C8 311 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 DGAT2L6Q6ZPD8 337 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 SLC29A4Q7RTT9 530 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 KIF18BQ86Y91 864 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 ANKMY2Q8IV38 441 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 PM20D2Q8IYS1 436 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 SLC35F6Q8N357 371 aa9.57□□□□□ -0.88
HDLBP-227ENST00000458564 ZNF441Q8N8Z8 693 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms