RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 TSPAN33Q86UF1 283 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 RBM45Q8IUH3 476 aaKnown RBP9.81□□□□□ -0.84
CLIP4-208ENST00000456385 NXPE1Q8N323 547 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 ZNF366Q8N895 744 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 TOR1AIP2Q8NFQ8 470 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 ASB11Q8WXH4 323 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 ATF6BQ99941 703 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 WFDC6Q9BQY6 131 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 AIFM2Q9BRQ8 373 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 HTATIP2Q9BUP3 242 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 DPCDQ9BVM2 203 aaPredicted RBP9.81□□□□□ -0.84
CLIP4-208ENST00000456385 SPATA6Q9NWH7 488 aaPredicted RBP9.81□□□□□ -0.84
CLIP4-208ENST00000456385 KCTD5Q9NXV2 234 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 FAM8A1Q9UBU6 413 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 NCKAP1Q9Y2A7 1128 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 PRG3Q9Y2Y8 225 aaPredicted RBP9.81□□□□□ -0.84
CLIP4-208ENST00000456385 RWDD3Q9Y3V2 267 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 NINQ8N4C6 2090 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 TRAV6A0A075B6T7 132 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 A0A1B0GVC2 190 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 A6NIN4 97 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 PRRG1O14668 218 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 CLDN11O75508 207 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 GJB5O95377 273 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 ICAM2P13598 275 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 CXCL3P19876 107 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 HNF1BP35680 557 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 SOX18P35713 384 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 LSM11P83369 360 aaKnown RBP eCLIP9.81□□□□□ -0.84
CLIP4-208ENST00000456385 B4GALNT1Q00973 533 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 LRRC74AQ0VAA2 488 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 RPA4Q13156 261 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 MRPL58Q14197 206 aaKnown RBP9.81□□□□□ -0.84
CLIP4-208ENST00000456385 GPR176Q14439 515 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 ANGPT1Q15389 498 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 AANATQ16613 207 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 CRB2Q5IJ48 1285 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 ANXA8L1Q5VT79 327 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 C12orf73Q69YU5 71 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 TYW3Q6IPR3 259 aaKnown RBP9.81□□□□□ -0.84
CLIP4-208ENST00000456385 CXorf57Q6NSI4 855 aaKnown RBP9.81□□□□□ -0.84
CLIP4-208ENST00000456385 KIAA1324Q6UXG2 1013 aaKnown RBP9.81□□□□□ -0.84
CLIP4-208ENST00000456385 QSOX2Q6ZRP7 698 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 TRILQ7L0X0 811 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 GHDCQ8N2G8 530 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 ZNF655Q8N720 491 aaPredicted RBP9.81□□□□□ -0.84
CLIP4-208ENST00000456385 OR52N2Q8NGI0 321 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 OR8J1Q8NGP2 316 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 CREB3L1Q96BA8 519 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 MYO19Q96H55 970 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 FUBP3Q96I24 572 aaKnown RBP eCLIP9.81□□□□□ -0.84
CLIP4-208ENST00000456385 LRR1Q96L50 414 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 MED18Q9BUE0 208 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 WRAP53Q9BUR4 548 aaKnown RBP9.81□□□□□ -0.84
CLIP4-208ENST00000456385 MED28Q9H204 178 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 PIGUQ9H490 435 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 GKN1Q9NS71 199 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 SLCO1C1Q9NYB5 712 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 ING4Q9UNL4 249 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 AP1M2Q9Y6Q5 423 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 CCDC88CQ9P219 2028 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 PLXNA3P51805 1871 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 RPS10-NUDT3A0A1W2PQS6 291 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 RNASET2O00584 256 aaKnown RBP9.8□□□□□ -0.84
CLIP4-208ENST00000456385 SLC30A4O14863 429 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 OAZ2O95190 189 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 RAB36O95755 333 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 ADAP00813 363 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 TPOP07202 933 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 OR12D1P0DN82 309 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 TFPIP10646 304 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 ELAVL4P26378 380 aaKnown RBP9.8□□□□□ -0.84
CLIP4-208ENST00000456385 BDKRB1P46663 353 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 WNT4P56705 351 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 CSTF1Q05048 431 aaKnown RBP9.8□□□□□ -0.84
CLIP4-208ENST00000456385 BCL2L1Q07817 233 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 EXOSC2Q13868 293 aaKnown RBP9.8□□□□□ -0.84
CLIP4-208ENST00000456385 GALEQ14376 348 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 SYT14P1Q58G82 188 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 BRAT1Q6PJG6 821 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 RFLNAQ6ZTI6 216 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 KIF18BQ86Y91 864 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 GPR26Q8NDV2 337 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 FOXJ1Q92949 421 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 UCN3Q969E3 161 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 ADAM2Q99965 735 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 TMED9Q9BVK6 235 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 C1QTNF6Q9BXI9 259 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 HDHD2Q9H0R4 259 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 POLR2J3Q9H1A7 115 aaKnown RBP9.8□□□□□ -0.84
CLIP4-208ENST00000456385 RC3H2Q9HBD1 1191 aaKnown RBP9.8□□□□□ -0.84
CLIP4-208ENST00000456385 TESQ9UGI8 421 aaKnown RBP9.8□□□□□ -0.84
CLIP4-208ENST00000456385 NDOR1Q9UHB4 597 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 STOML2Q9UJZ1 356 aa9.8□□□□□ -0.84
CLIP4-208ENST00000456385 FBXO9Q9UK97 447 aaPredicted RBP9.8□□□□□ -0.84
CLIP4-208ENST00000456385 DIMT1Q9UNQ2 313 aaKnown RBP9.8□□□□□ -0.84
CLIP4-208ENST00000456385 A0A0U1RQF3 1178 aa9.79□□□□□ -0.84
CLIP4-208ENST00000456385 SAP18O00422 153 aaKnown RBP9.79□□□□□ -0.84
CLIP4-208ENST00000456385 DVL2O14641 736 aa9.79□□□□□ -0.84
CLIP4-208ENST00000456385 LZTS3O60299 673 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms