RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 BECN1Q14457 450 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 KCTD19Q17RG1 926 aaPredicted RBP1.33□□□□□ -2.2
LRCH3-209ENST00000452660 LACTB2Q53H82 288 aaPredicted RBP1.33□□□□□ -2.2
LRCH3-209ENST00000452660 ARMC4Q5T2S8 1044 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 PLPP4Q5VZY2 271 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 OTPQ5XKR4 325 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 C4orf50Q6ZRC1 276 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 ZBTB49Q6ZSB9 765 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 CENPVQ7Z7K6 275 aaPredicted RBP1.33□□□□□ -2.2
LRCH3-209ENST00000452660 TLK2Q86UE8 772 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 APOBEC3FQ8IUX4 373 aaKnown RBP1.33□□□□□ -2.2
LRCH3-209ENST00000452660 CAMKVQ8NCB2 501 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 KIR2DL5BQ8NHK3 375 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 C8orf46Q8TAG6 207 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 TBCKQ8TEA7 893 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 EXOC4Q96A65 974 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 MPP4Q96JB8 637 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 GUCD1Q96NT3 240 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 CCDC106Q9BWC9 280 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 PRO3102Q9H379 93 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 XAB2Q9HCS7 855 aaKnown RBP1.33□□□□□ -2.2
LRCH3-209ENST00000452660 HAUS2Q9NVX0 235 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 DBF4Q9UBU7 674 aaPredicted RBP1.33□□□□□ -2.2
LRCH3-209ENST00000452660 CFDP1Q9UEE9 299 aaPredicted RBP1.33□□□□□ -2.2
LRCH3-209ENST00000452660 KLK12Q9UKR0 248 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 ZNF346Q9UL40 294 aaKnown RBP1.33□□□□□ -2.2
LRCH3-209ENST00000452660 TMEM5Q9Y2B1 443 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 TRANK1O15050 2925 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 FASNP49327 2511 aaKnown RBP1.33□□□□□ -2.2
LRCH3-209ENST00000452660 DNAH14Q0VDD8 3507 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 XIRP2A4UGR9 3374 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 BRD4O60885 1362 aaPredicted RBP1.33□□□□□ -2.2
LRCH3-209ENST00000452660 CLTCL1P53675 1640 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 TRPM1Q7Z4N2 1603 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 RAI1Q7Z5J4 1906 aaPredicted RBP1.32□□□□□ -2.2
LRCH3-209ENST00000452660 KIF1AQ12756 1690 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 CCDC144AA2RUR9 1427 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 USP6P35125 1406 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 KIAA1107Q9UPP5 1409 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 KMT2BQ9UMN6 2715 aaPredicted RBP1.32□□□□□ -2.2
LRCH3-209ENST00000452660 CCDC141Q6ZP82 1450 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 SPTBN4Q9H254 2564 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 DMDP11532 3685 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 RBBP6Q7Z6E9 1792 aaKnown RBP1.32□□□□□ -2.2
LRCH3-209ENST00000452660 ADAMTSL1Q8N6G6 1762 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 RGPD5Q99666 1765 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 MYO10Q9HD67 2058 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 GPR179Q6PRD1 2367 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 TRAV18A0A075B6X5 111 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 PGAM2P15259 253 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 EIF2DP41214 584 aaKnown RBP1.32□□□□□ -2.2
LRCH3-209ENST00000452660 RXRGP48443 463 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 CSE1LP55060 971 aaKnown RBP1.32□□□□□ -2.2
LRCH3-209ENST00000452660 EVCP57679 992 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 RBBP4Q09028 425 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 STK4Q13043 487 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 CRMP1Q14194 572 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 IL11RAQ14626 422 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 TFDP3Q5H9I0 405 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 CST9Q5W186 159 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 IRGCQ6NXR0 463 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 MKXQ8IYA7 352 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 SLC22A18ASQ8N1D0 253 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 ARL14Q8N4G2 192 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 LINC01555Q8NAE3 123 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 TEKT4Q8WW24 435 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 MXD3Q9BW11 206 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 UBQLN3Q9H347 655 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 SNX25Q9H3E2 840 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 GHITMQ9H3K2 345 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 RPF1Q9H9Y2 349 aaKnown RBP1.32□□□□□ -2.2
LRCH3-209ENST00000452660 C3orf14Q9HBI5 128 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 CPSF2Q9P2I0 782 aaKnown RBP1.32□□□□□ -2.2
LRCH3-209ENST00000452660 VPS28Q9UK41 221 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 ABCG2Q9UNQ0 655 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 CDC42BPGQ6DT37 1551 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 EPG5Q9HCE0 2579 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 C5P01031 1676 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 LMO7Q8WWI1 1683 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 LRPPRCP42704 1394 aaKnown RBP1.32□□□□□ -2.2
LRCH3-209ENST00000452660 PLEKHH1Q9ULM0 1364 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 MYO15AQ9UKN7 3530 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 BDP1A6H8Y1 2624 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 LY75O60449 1722 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 IFT172Q9UG01 1749 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 NAIPQ13075 1403 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 ARHGAP31Q2M1Z3 1444 aa1.32□□□□□ -2.2
LRCH3-209ENST00000452660 LAMB2P55268 1798 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 TAF1LQ8IZX4 1826 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 SLIT3O75094 1523 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 CACNA1SQ13698 1873 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 UBR3Q6ZT12 1888 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 ALPK3Q96L96 1907 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 DICER1Q9UPY3 1922 aaKnown RBP1.31□□□□□ -2.2
LRCH3-209ENST00000452660 ACTL6AO96019 429 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 SNRPCP09234 159 aaKnown RBP1.31□□□□□ -2.2
LRCH3-209ENST00000452660 MMP10P09238 476 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 CYP11B2P19099 503 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 PSMA3P25788 255 aa1.31□□□□□ -2.2
LRCH3-209ENST00000452660 PPP2R1AP30153 589 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms