RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.61□□□□□ -1.03
NIPBL-202ENST00000448238 GJE1A6NN92 205 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 TMEM63AO94886 807 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 IMPA1P29218 277 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 FAM69AQ5T7M9 428 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 OR52W1Q6IF63 320 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 ZNF836Q6ZNA1 936 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 B3GNT7Q8NFL0 401 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 OR2T33Q8NG76 320 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 OR2T35Q8NGX2 323 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 SLC2A12Q8TD20 617 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 ZNF331Q9NQX6 463 aaPredicted RBP8.61□□□□□ -1.03
NIPBL-202ENST00000448238 TRUB2O95900 331 aaKnown RBP8.61□□□□□ -1.03
NIPBL-202ENST00000448238 GOT2P00505 430 aaKnown RBP8.61□□□□□ -1.03
NIPBL-202ENST00000448238 SULT1A2P50226 295 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 SOHLH1Q5JUK2 328 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 FAM180BQ6P0A1 224 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 ZNF679Q8IYX0 411 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 NICN1Q9BSH3 213 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 EBF3Q9H4W6 596 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 GPR160Q9UJ42 338 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 OAZ3Q9UMX2 235 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 ADAM11O75078 769 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 CLDN11O75508 207 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 EEFSECP57772 596 aaKnown RBP8.61□□□□□ -1.03
NIPBL-202ENST00000448238 TSTD2Q5T7W7 516 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 FAM129CQ86XR2 697 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 KCNRGQ8N5I3 272 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 L3MBTL4Q8NA19 623 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 OR8U1Q8NH10 309 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 FANK1Q8TC84 345 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 THAP4Q8WY91 577 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 WDR77Q9BQA1 342 aaPredicted RBP8.61□□□□□ -1.03
NIPBL-202ENST00000448238 GPN2Q9H9Y4 310 aaPredicted RBP8.61□□□□□ -1.03
NIPBL-202ENST00000448238 ISYNA1Q9NPH2 558 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 KLHL42Q9P2K6 505 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 PRSS44E7EML9 344 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 ENTPD3O75355 529 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 MED6O75586 246 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 ADRB3P13945 408 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 TRHRP34981 398 aaPredicted RBP8.61□□□□□ -1.03
NIPBL-202ENST00000448238 TGFB2P61812 414 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 GAS6Q14393 721 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 GANABQ14697 944 aaKnown RBP8.61□□□□□ -1.03
NIPBL-202ENST00000448238 AAK1Q2M2I8 961 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 ZMAT1Q5H9K5 638 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 GDPD4Q6W3E5 623 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 HS3ST5Q8IZT8 346 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 SYNE4Q8N205 404 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 MS4A15Q8N5U1 240 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 SIGLECL1Q8N7X8 197 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 SETD7Q8WTS6 366 aaKnown RBP8.61□□□□□ -1.03
NIPBL-202ENST00000448238 TBC1D20Q96BZ9 403 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 CHFRQ96EP1 664 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 PGAM5Q96HS1 289 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 DPYSL5Q9BPU6 564 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 CWH43Q9H720 699 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 CLEC4EQ9ULY5 219 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 PUS1Q9Y606 427 aaKnown RBP eCLIP8.61□□□□□ -1.03
NIPBL-202ENST00000448238 VTNP04004 478 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 BMP4P12644 408 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 GKP32189 559 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 MC3RP41968 323 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 HOXA1P49639 335 aaPredicted RBP8.61□□□□□ -1.03
NIPBL-202ENST00000448238 HNF4GQ14541 408 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 SAT2Q96F10 170 aaPredicted RBP8.61□□□□□ -1.03
NIPBL-202ENST00000448238 PGLYRP2Q96PD5 576 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 MECRQ9BV79 373 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 HEG1Q9ULI3 1381 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 TRBV2A0A0J9YWF9 115 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 SOBPA7XYQ1 873 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 E5RJQ4 531 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 PENKP01210 267 aaPredicted RBP8.61□□□□□ -1.03
NIPBL-202ENST00000448238 C2P06681 752 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 AREGP15514 252 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 CEBPAP49715 358 aaPredicted RBP8.61□□□□□ -1.03
NIPBL-202ENST00000448238 NUMBP49757 651 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 SF3B4Q15427 424 aaKnown RBP eCLIP8.61□□□□□ -1.032e-6■■■□□ 18.7
NIPBL-202ENST00000448238 TEX261Q6UWH6 196 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 TMPRSS11FQ6ZWK6 438 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 SPTSSAQ969W0 71 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 G6PC3Q9BUM1 346 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 NMNAT2Q9BZQ4 307 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 WASH6PQ9NQA3 447 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 PNPOQ9NVS9 261 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 U3KQ87 197 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 FAM186AA6NE01 2351 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 DVL1O14640 695 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 GOSR2O14653 212 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 PCDH17O14917 1159 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 AMY2AP04746 511 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 C1GALT1C1LP0DN25 315 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 TPSB2P20231 275 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 GSK3AP49840 483 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 DVL1P1P54792 670 aaPredicted RBP8.61□□□□□ -1.03
NIPBL-202ENST00000448238 KCNC4Q03721 635 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 TPSAB1Q15661 275 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 UBE2NLQ5JXB2 153 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 PRSS55Q6UWB4 352 aaPredicted RBP8.61□□□□□ -1.03
NIPBL-202ENST00000448238 LARP4Q71RC2 724 aaKnown RBP eCLIP8.61□□□□□ -1.034e-10■■■□□ 16.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms