RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 TCTN3Q6NUS6 607 aa16.01■□□□□ 0.15
AP1S3-207ENST00000444408 SLC48A1Q6P1K1 146 aa16.01■□□□□ 0.15
AP1S3-207ENST00000444408 LINC00696Q6ZRV3 163 aa16.01■□□□□ 0.15
AP1S3-207ENST00000444408 ASB18Q6ZVZ8 466 aa16.01■□□□□ 0.15
AP1S3-207ENST00000444408 FCRL1Q96LA6 429 aa16.01■□□□□ 0.15
AP1S3-207ENST00000444408 SMAD5Q99717 465 aaKnown RBP16.01■□□□□ 0.15
AP1S3-207ENST00000444408 NPAS2Q99743 824 aa16.01■□□□□ 0.15
AP1S3-207ENST00000444408 SLC25A18Q9H1K4 315 aa16.01■□□□□ 0.15
AP1S3-207ENST00000444408 WDR41Q9HAD4 459 aa16.01■□□□□ 0.15
AP1S3-207ENST00000444408 ADAP2Q9NPF8 381 aa16.01■□□□□ 0.15
AP1S3-207ENST00000444408 MARCOQ9UEW3 520 aaPredicted RBP16.01■□□□□ 0.15
AP1S3-207ENST00000444408 EXO1Q9UQ84 846 aaKnown RBP16.01■□□□□ 0.15
AP1S3-207ENST00000444408 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.01■□□□□ 0.15
AP1S3-207ENST00000444408 DOCK10Q96BY6 2186 aa16.01■□□□□ 0.15
AP1S3-207ENST00000444408 C1orf226A1L170 272 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 BLACEA4D250 179 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 ERAL1O75616 437 aaKnown RBP16■□□□□ 0.15
AP1S3-207ENST00000444408 ALOX15P16050 662 aaPredicted RBP16■□□□□ 0.15
AP1S3-207ENST00000444408 TNNI3P19429 210 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 STT3AP46977 705 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 GPR143P51810 404 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 HK2P52789 917 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 TRA2BP62995 288 aaKnown RBP16■□□□□ 0.15
AP1S3-207ENST00000444408 OCRLQ01968 901 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 SERTAD2Q14140 314 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 ELAVL1Q15717 326 aaKnown RBP16■□□□□ 0.15
AP1S3-207ENST00000444408 EXT1Q16394 746 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 APCDD1LQ8NCL9 501 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 B3GNT7Q8NFL0 401 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 CLHC1Q8NHS4 586 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 PUM2Q8TB72 1066 aaKnown RBP eCLIP16■□□□□ 0.15
AP1S3-207ENST00000444408 M1APQ8TC57 530 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 ELP5Q8TE02 316 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 NCLNQ969V3 563 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 C19orf60Q96EN9 201 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 DGAT2Q96PD7 388 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 KCNK13Q9HB14 408 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 MMP25Q9NPA2 562 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 BAIAP2L1Q9UHR4 511 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 CSAG2Q9Y5P2 127 aa16■□□□□ 0.15
AP1S3-207ENST00000444408 C17orf105B2RV13 164 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 PRKNO60260 465 aaPredicted RBP15.99■□□□□ 0.15
AP1S3-207ENST00000444408 GUCY1B2O75343 617 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 DDAH2O95865 285 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 F10P00742 488 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 KITP10721 976 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 ICAM2P13598 275 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 SDC1P18827 310 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 SOX11P35716 441 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 FEN1P39748 380 aaKnown RBP15.99■□□□□ 0.15
AP1S3-207ENST00000444408 XKP51811 444 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 KCNC4Q03721 635 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 ZNF763Q0D2J5 394 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 C2orf80Q0P641 193 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 NFATC3Q12968 1075 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 C6orf136Q5SQH8 315 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 VWA5B1Q5TIE3 1220 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 AGAP7PQ5VUJ5 663 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 ATG16L1Q676U5 607 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 FAM71E1Q6IPT2 247 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 OR4K14Q8NGD5 310 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 NUDT8Q8WV74 236 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 GFM2Q969S9 779 aaKnown RBP15.99■□□□□ 0.15
AP1S3-207ENST00000444408 CNRIP1Q96F85 164 aaPredicted RBP15.99■□□□□ 0.15
AP1S3-207ENST00000444408 AGAP4Q96P64 663 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 TSSK3Q96PN8 268 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 C1orf50Q9BV19 199 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 MFRPQ9BY79 579 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 NUF2Q9BZD4 464 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 OR8D2Q9GZM6 311 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 ACBD3Q9H3P7 528 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 THAP1Q9NVV9 213 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 PLA2G3Q9NZ20 509 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 CLCA3PQ9Y6N3 262 aa15.99■□□□□ 0.15
AP1S3-207ENST00000444408 TRBV11-1A0A0K0K1C0 115 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 LRATO95237 230 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 CT62P0C5K7 136 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 BCKDHAP12694 445 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 PIK3R1P27986 724 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 IRAK1BP1Q5VVH5 260 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 ANKRD26P1Q6NSI1 321 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 C16orf47Q6ZP98 133 aaPredicted RBP15.98■□□□□ 0.15
AP1S3-207ENST00000444408 CRLF3Q8IUI8 442 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 TRIM42Q8IWZ5 723 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 ST13P4Q8IZP2 240 aaPredicted RBP15.98■□□□□ 0.15
AP1S3-207ENST00000444408 TMEM132CQ8N3T6 1108 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 FAM76AQ8TAV0 307 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 RAB3IL1Q8TBN0 382 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 SLC2A12Q8TD20 617 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 THAP3Q8WTV1 239 aaPredicted RBP15.98■□□□□ 0.15
AP1S3-207ENST00000444408 EXOSC8Q96B26 276 aaKnown RBP15.98■□□□□ 0.15
AP1S3-207ENST00000444408 KLHL29Q96CT2 875 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 TUBGCP3Q96CW5 907 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 FAIM2Q9BWQ8 316 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 LIN28AQ9H9Z2 209 aaKnown RBP15.98■□□□□ 0.15
AP1S3-207ENST00000444408 MYNNQ9NPC7 610 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 SLCO1B3Q9NPD5 702 aa15.98■□□□□ 0.15
AP1S3-207ENST00000444408 INTS9Q9NV88 658 aaKnown RBP15.98■□□□□ 0.15
AP1S3-207ENST00000444408 KLF11O14901 512 aa15.97■□□□□ 0.15
AP1S3-207ENST00000444408 AKAP10O43572 662 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms