RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 LIM2P55344 173 aa19.31■□□□□ 0.68
SHOX2-203ENST00000441443 GPNMBQ14956 572 aa19.31■□□□□ 0.68
SHOX2-203ENST00000441443 POU4F3Q15319 338 aa19.31■□□□□ 0.68
SHOX2-203ENST00000441443 ANKS3Q6ZW76 656 aa19.31■□□□□ 0.68
SHOX2-203ENST00000441443 DDX53Q86TM3 631 aaKnown RBP19.31■□□□□ 0.68
SHOX2-203ENST00000441443 CIDECQ96AQ7 238 aaPredicted RBP19.31■□□□□ 0.68
SHOX2-203ENST00000441443 ZC3HAV1LQ96H79 300 aaKnown RBP19.31■□□□□ 0.68
SHOX2-203ENST00000441443 C12orf10Q9HB07 376 aa19.31■□□□□ 0.68
SHOX2-203ENST00000441443 PLXNA3P51805 1871 aa19.31■□□□□ 0.68
SHOX2-203ENST00000441443 NPIPB8E9PQR5 432 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 KPNA5O15131 536 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 PDPK1O15530 556 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 OSMP13725 252 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 AVPR1BP47901 424 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 PER3P56645 1201 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 ZNF284Q2VY69 593 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 TSPAN33Q86UF1 283 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 LAPTM4BQ86VI4 370 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 HOMEZQ8IX15 550 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 HUS1BQ8NHY5 278 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 GATAD2BQ8WXI9 593 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 TM9SF4Q92544 642 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 C1QTNF7Q9BXJ2 289 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 SLC12A9Q9BXP2 914 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 UCKL1Q9NWZ5 548 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 TEX51A0A1B0GUA7 166 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 E7EQ34 232 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 GTPBP1O00178 669 aaKnown RBP19.3■□□□□ 0.68
SHOX2-203ENST00000441443 CASKO14936 926 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 OR10H3O60404 316 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 RECKO95980 971 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 ALDH1A1P00352 501 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 HNF1BP35680 557 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 CTBP2P56545 445 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 HMX1Q9NP08 348 aaPredicted RBP19.3■□□□□ 0.68
SHOX2-203ENST00000441443 DSPPQ9NZW4 1301 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 TRBV5-4A0A0C4DH59 114 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 RFPL3O75679 317 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 IFNW1P05000 195 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 XKP51811 444 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 PTPN5P54829 565 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 PFN3P60673 137 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 LRRC74AQ0VAA2 488 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 HEPACAMQ14CZ8 416 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 FCN2Q15485 313 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 HECTD3Q5T447 861 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 ANXA8L1Q5VT79 327 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 TEX261Q6UWH6 196 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 DNAJC5GQ8N7S2 189 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 ZNF680Q8NEM1 530 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 OR52I1Q8NGK6 324 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 MGAT4AQ9UM21 535 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 U3KQ87 197 aa19.3■□□□□ 0.68
SHOX2-203ENST00000441443 OR5K3A6NET4 321 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 SLC43A1O75387 559 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 CPEP16870 476 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 RHCEP18577 417 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 MC1RQ01726 317 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 TAGLNQ01995 201 aaKnown RBP19.29■□□□□ 0.68
SHOX2-203ENST00000441443 SPDYE7PQ495Y7 208 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 LHX8Q68G74 356 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 CXorf57Q6NSI4 855 aaKnown RBP19.29■□□□□ 0.68
SHOX2-203ENST00000441443 FAM180BQ6P0A1 224 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 WDR20Q8TBZ3 569 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 ZNF431Q8TF32 576 aaPredicted RBP19.29■□□□□ 0.68
SHOX2-203ENST00000441443 AUTS2Q8WXX7 1259 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 AP3S1Q92572 193 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 TMEM43Q9BTV4 400 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 B3GNT4Q9C0J1 378 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 C1GALT1Q9NS00 363 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 EXO1Q9UQ84 846 aaKnown RBP19.29■□□□□ 0.68
SHOX2-203ENST00000441443 SNTNA6NMZ2 147 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 PITPNM1O00562 1244 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 HLA-DQB1P01920 261 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 ATF4P18848 351 aaPredicted RBP19.29■□□□□ 0.68
SHOX2-203ENST00000441443 SOX9P48436 509 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 DOC2AQ14183 400 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 PUM1Q14671 1186 aaKnown RBP eCLIP19.29■□□□□ 0.68
SHOX2-203ENST00000441443 SLC5A12Q1EHB4 618 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 TYW3Q6IPR3 259 aaKnown RBP19.29■□□□□ 0.68
SHOX2-203ENST00000441443 GPR26Q8NDV2 337 aa19.29■□□□□ 0.68
SHOX2-203ENST00000441443 PRKYO43930 277 aa19.28■□□□□ 0.68
SHOX2-203ENST00000441443 TSPAN9O75954 239 aa19.28■□□□□ 0.68
SHOX2-203ENST00000441443 GSTM1P09488 218 aa19.28■□□□□ 0.68
SHOX2-203ENST00000441443 PPP3R1P63098 170 aa19.28■□□□□ 0.68
SHOX2-203ENST00000441443 B4GALNT1Q00973 533 aa19.28■□□□□ 0.68
SHOX2-203ENST00000441443 FABP5Q01469 135 aa19.28■□□□□ 0.68
SHOX2-203ENST00000441443 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.28■□□□□ 0.68
SHOX2-203ENST00000441443 ASB11Q8WXH4 323 aa19.28■□□□□ 0.68
SHOX2-203ENST00000441443 SLC28A3Q9HAS3 691 aa19.28■□□□□ 0.68
SHOX2-203ENST00000441443 SPATA6Q9NWH7 488 aaPredicted RBP19.28■□□□□ 0.68
SHOX2-203ENST00000441443 HCN2Q9UL51 889 aa19.28■□□□□ 0.68
SHOX2-203ENST00000441443 PCDHGB7Q9Y5F8 929 aa19.28■□□□□ 0.68
SHOX2-203ENST00000441443 H7C4K7 107 aa19.28■□□□□ 0.68
SHOX2-203ENST00000441443 BNIP3LO60238 219 aa19.28■□□□□ 0.68
SHOX2-203ENST00000441443 CHI3L1P36222 383 aaPredicted RBP19.28■□□□□ 0.68
SHOX2-203ENST00000441443 OPRD1P41143 372 aa19.28■□□□□ 0.68
SHOX2-203ENST00000441443 RPS26P11Q5JNZ5 115 aaPredicted RBP19.28■□□□□ 0.68
SHOX2-203ENST00000441443 RFLNAQ6ZTI6 216 aa19.28■□□□□ 0.68
SHOX2-203ENST00000441443 NPAS4Q8IUM7 802 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms