RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 CLDN22Q8N7P3 220 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 OR8H1Q8NGG4 311 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 DNAJA4Q8WW22 397 aaPredicted RBP8.16□□□□□ -1.1
HPS4-206ENST00000439453 OVCA2Q8WZ82 227 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 SMARCD2Q92925 531 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 ZC3HAV1LQ96H79 300 aaKnown RBP8.16□□□□□ -1.1
HPS4-206ENST00000439453 COPS8Q99627 209 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 POLR2J2Q9GZM3 115 aaKnown RBP8.16□□□□□ -1.1
HPS4-206ENST00000439453 SLC25A19Q9HC21 320 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 MCUBQ9NWR8 336 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 MARCH2Q9P0N8 246 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 FTSJ1Q9UET6 329 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 EML5Q05BV3 1969 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 CHD5Q8TDI0 1954 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 WASHC1A8K0Z3 465 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 TSC22D2O75157 780 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 PDGFAP04085 211 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 MSL3P1P0C860 447 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 LAMP1P11279 417 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 TACR2P21452 398 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 RRAS2P62070 204 aaPredicted RBP8.15□□□□□ -1.1
HPS4-206ENST00000439453 MRPL28Q13084 256 aaKnown RBP8.15□□□□□ -1.1
HPS4-206ENST00000439453 RGNQ15493 299 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 PXDC1Q5TGL8 231 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 MZT2BQ6NZ67 158 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 CERS6Q6ZMG9 384 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 CLDN19Q8N6F1 224 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 C11orf65Q8NCR3 313 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 C19orf18Q8NEA5 215 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 ATP6V1C2Q8NEY4 427 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 OR9Q1Q8NGQ5 310 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 CDC26Q8NHZ8 85 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 CSGALNACT1Q8TDX6 532 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 SH3KBP1Q96B97 665 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 TMEM80Q96HE8 168 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 IL4I1Q96RQ9 567 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 SLC32A1Q9H598 525 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 CCSER2Q9H7U1 834 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 RDH14Q9HBH5 336 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 LATS2Q9NRM7 1088 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 RBFOX1Q9NWB1 397 aaKnown RBP8.15□□□□□ -1.1
HPS4-206ENST00000439453 TXNL4BQ9NX01 149 aaKnown RBP8.15□□□□□ -1.1
HPS4-206ENST00000439453 IL17CQ9P0M4 197 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 LINC00862A6NCI5 91 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 J3KTA2 159 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 HCN1O60741 890 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 TNFRSF21O75509 655 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 OR7A10O76100 309 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 HBQ1P09105 142 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 SRCP12931 536 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 ACPPP15309 386 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 RPS3P23396 243 aaKnown RBP eCLIP8.15□□□□□ -1.1
HPS4-206ENST00000439453 POU1F1P28069 291 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 CRISP1P54107 249 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 POU6F2P78424 691 aaPredicted RBP8.15□□□□□ -1.1
HPS4-206ENST00000439453 WSCD2Q2TBF2 565 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 DGKKQ5KSL6 1271 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 C10orf120Q5SQS8 335 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 LIPKQ5VXJ0 399 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 TRIQKQ629K1 86 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 NAGSQ8N159 534 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 DUSP18Q8NEJ0 188 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 FAM46DQ8NEK8 389 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 OR8J2Q8NGG1 315 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 KLHL6Q8WZ60 621 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 EDAQ92838 391 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 ZBED6CLQ96FA7 236 aaPredicted RBP8.15□□□□□ -1.1
HPS4-206ENST00000439453 DCLRE1CQ96SD1 692 aaKnown RBP8.15□□□□□ -1.1
HPS4-206ENST00000439453 MND1Q9BWT6 205 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 MAGEH1Q9H213 219 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 SLC2A4RGQ9NR83 387 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 NLKQ9UBE8 527 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 ENOPH1Q9UHY7 261 aa8.15□□□□□ -1.1
HPS4-206ENST00000439453 PRAMEF25A6NGN4 478 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 OTOL1A6NHN0 477 aaPredicted RBP8.15□□□□□ -1.11
HPS4-206ENST00000439453 COCHO43405 550 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 PCDH7O60245 1069 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 PRMT3O60678 531 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 ANXA5P08758 320 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 APEX1P27695 318 aaKnown RBP8.15□□□□□ -1.11
HPS4-206ENST00000439453 DGKEP52429 567 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 CLDN20P56880 219 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 BOP1Q14137 746 aaKnown RBP8.15□□□□□ -1.11
HPS4-206ENST00000439453 TEAD4Q15561 434 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 ZBTB37Q5TC79 503 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 FRMPD2BQ6IN97 320 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 KLHL17Q6TDP4 642 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 FAM151BQ6UXP7 276 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 PHC2Q8IXK0 858 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 C9orf62Q8N4C0 152 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 RNF175Q8N4F7 328 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 AQP11Q8NBQ7 271 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 HYLS1Q96M11 299 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 QRFPRQ96P65 431 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 C17orf62Q9BQA9 187 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 FBXO44Q9H4M3 255 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 FZD3Q9NPG1 666 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 ACER3Q9NUN7 267 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 FANCMQ8IYD8 2048 aa8.15□□□□□ -1.11
HPS4-206ENST00000439453 FAM240BA0A1B0GVZ2 78 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms