RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 IKZF5Q9H5V7 419 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 MRPS33Q9Y291 106 aaKnown RBP6.38□□□□□ -1.39
CSDE1-205ENST00000438362 MCM3APO60318 1980 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 LRRC72A6NJI9 287 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 ANKRD28O15084 1053 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 SCAMP1O15126 338 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 TEX28O15482 410 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 RCBTB2O95199 551 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 SERPINA3P01011 423 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 RLN1P04808 185 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 ADORA3P0DMS8 318 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 IL1RNP18510 177 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 SOX3P41225 446 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 CTSOP43234 321 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-205ENST00000438362 MLLT10P55197 1068 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 HBA1P69905 142 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 MGAT3Q09327 533 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF155Q12901 538 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-205ENST00000438362 FAM180BQ6P0A1 224 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 PAMR1Q6UXH9 720 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 SLC46A3Q7Z3Q1 461 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 TMEM25Q86YD3 366 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 CCDC116Q8IYX3 515 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 METTL4Q8N3J2 472 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 TOMM5Q8N4H5 51 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 GDPD1Q8N9F7 314 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 ATP6V1C2Q8NEY4 427 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 GPR151Q8TDV0 419 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 GATAD2BQ8WXI9 593 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 KLK6Q92876 244 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 UBE2FQ969M7 185 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 CD180Q99467 661 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 OR51I1Q9H343 314 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 DPAGT1Q9H3H5 408 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 NTN4Q9HB63 628 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 ENAMQ9NRM1 1142 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 HCSTQ9UBK5 93 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 EXTL2Q9UBQ6 330 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 IKZF2Q9UKS7 526 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 PCDHGA2Q9Y5H1 932 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 DOCK1Q14185 1865 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 NUP214P35658 2090 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-205ENST00000438362 WNK3Q9BYP7 1800 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 EDDM13A0A1B0GTR0 161 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 TTC34A8MYJ7 566 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 PCDH17O14917 1159 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 PCDHGA12O60330 932 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 TSPAN12O95859 305 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 HLA-EP13747 358 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 TNFSF8P32971 234 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 NUP62P37198 522 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-205ENST00000438362 SLC3A1Q07837 685 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 STEAP3Q658P3 488 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 LIN54Q6MZP7 749 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 XKRXQ6PP77 449 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 FRRS1Q6ZNA5 592 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-205ENST00000438362 TCEAL8Q8IYN2 117 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 ENTHD1Q8IYW4 607 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 CADM3Q8N126 398 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 OR8H3Q8N146 312 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 IQCF1Q8N6M8 205 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 PSD4Q8NDX1 1056 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 PJA1Q8NG27 643 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 OR51G2Q8NGK0 314 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 ISG20Q96AZ6 181 aaKnown RBP6.38□□□□□ -1.39
CSDE1-205ENST00000438362 CLIP3Q96DZ5 547 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 NARS2Q96I59 477 aaKnown RBP6.38□□□□□ -1.39
CSDE1-205ENST00000438362 CASD1Q96PB1 797 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 SECISBP2Q96T21 854 aaKnown RBP6.38□□□□□ -1.39
CSDE1-205ENST00000438362 TP63Q9H3D4 680 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-205ENST00000438362 NLGN3Q9NZ94 848 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 HCN2Q9UL51 889 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 CARD8Q9Y2G2 431 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 WDR45Q9Y484 360 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 ANKRD31Q8N7Z5 1873 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 TAF1LQ8IZX4 1826 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 LY75O60449 1722 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 KMOO15229 486 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 IGLV3-27P01718 113 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 APODP05090 189 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 CTSEP14091 401 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 UGT2B10P36537 528 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 LIPAP38571 399 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 MTNR1AP48039 350 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 GBX2P52951 348 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-205ENST00000438362 PIN1Q13526 163 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-205ENST00000438362 SLC5A12Q1EHB4 618 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 RPS26P11Q5JNZ5 115 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-205ENST00000438362 DUS1LQ6P1R4 473 aaKnown RBP6.37□□□□□ -1.39
CSDE1-205ENST00000438362 VITQ6UXI7 678 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 HMGN2P46Q86SG4 172 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 ZFP41Q8N8Y5 198 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 SUN3Q8TAQ9 357 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 LRRC20Q8TCA0 184 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 OTUB2Q96DC9 234 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 KCNK12Q9HB15 430 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 DMRT3Q9NQL9 472 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF224Q9NZL3 707 aa6.37□□□□□ -1.39
CSDE1-205ENST00000438362 KLK4Q9Y5K2 254 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms