RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 IL1RL2Q9HB29 575 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 DMRT3Q9NQL9 472 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 ANGPTL3Q9Y5C1 460 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 SPACA6W5XKT8 324 aa13.15□□□□□ -0.3
SMARCE1-205ENST00000431889 ZFHX3Q15911 3703 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 KIAA1549Q9HCM3 1950 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 FAM187AA6NFU0 413 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 TMPRSS11DO60235 418 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 KERAO60938 352 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 LTA4HP09960 611 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 GFAPP14136 432 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 IGFBP2P18065 325 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 MSX1P28360 303 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 HPDP32754 393 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 ARL1P40616 181 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 MAN2A2P49641 1150 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 KCNJ2P63252 427 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 TNFRSF17Q02223 184 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 TBCCQ15814 346 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 CPSF6Q16630 551 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 ZNF791Q3KP31 576 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 DEPDC1Q5TB30 811 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 OPN5Q6U736 354 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 LYPD8Q6UX82 237 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 WDR53Q7Z5U6 358 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 CENPLQ8N0S6 344 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 ACBD4Q8NC06 268 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 OR5L2Q8NGL0 311 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 RBM18Q96H35 190 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 ROGDIQ9GZN7 287 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 ACTR8Q9H981 624 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 PROK2Q9HC23 129 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 ZNF358Q9NW07 568 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 CPSF2Q9P2I0 782 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 RNF11Q9Y3C5 154 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 ARHGAP21Q5T5U3 1957 aa13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 ZNF469Q96JG9 3925 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-205ENST00000431889 A0A1W2PR48 441 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 OR10H2O60403 315 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 COX7A2P14406 83 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 EPB42P16452 691 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 SSTR4P31391 388 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 CASP2P42575 452 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 DLX5P56178 289 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 SLC10A1Q14973 349 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 TESK1Q15569 626 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 TMEM35AQ53FP2 167 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 CDKL4Q5MAI5 379 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 NDUFAF5Q5TEU4 345 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 B3GNT6Q6ZMB0 384 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 RPS27LQ71UM5 84 aaKnown RBP13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 DMRTC2Q8IXT2 367 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 PRR22Q8IZ63 422 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 SRFBP1Q8NEF9 429 aaKnown RBP13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 RGMAQ96B86 450 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 TREX2Q9BQ50 279 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 ZNF559Q9BR84 538 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 ZNF717Q9BY31 904 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 LIME1Q9H400 295 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 NMRAL1Q9HBL8 299 aa13.13□□□□□ -0.31
SMARCE1-205ENST00000431889 TRGV5A0A0B4J1U4 118 aa13.12□□□□□ -0.31
SMARCE1-205ENST00000431889 HMX2A2RU54 273 aa13.12□□□□□ -0.31
SMARCE1-205ENST00000431889 PGRMC2O15173 223 aa13.12□□□□□ -0.31
SMARCE1-205ENST00000431889 EIF3HO15372 352 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMARCE1-205ENST00000431889 IGHG3P01860 377 aa13.12□□□□□ -0.31
SMARCE1-205ENST00000431889 IGKV3-11P04433 115 aa13.12□□□□□ -0.31
SMARCE1-205ENST00000431889 C2P06681 752 aa13.12□□□□□ -0.31
SMARCE1-205ENST00000431889 ALOX15P16050 662 aaPredicted RBP13.12□□□□□ -0.31
SMARCE1-205ENST00000431889 SLC22A10Q63ZE4 541 aa13.12□□□□□ -0.31
SMARCE1-205ENST00000431889 DESI1Q6ICB0 168 aa13.12□□□□□ -0.31
SMARCE1-205ENST00000431889 MAATS1Q7Z4T9 603 aa13.12□□□□□ -0.31
SMARCE1-205ENST00000431889 GOLGA7Q7Z5G4 137 aa13.12□□□□□ -0.31
SMARCE1-205ENST00000431889 PLD6Q8N2A8 252 aaKnown RBP13.12□□□□□ -0.31
SMARCE1-205ENST00000431889 GOLM1Q8NBJ4 401 aa13.12□□□□□ -0.31
SMARCE1-205ENST00000431889 UBE2E3Q969T4 207 aa13.12□□□□□ -0.31
SMARCE1-205ENST00000431889 UTP11Q9Y3A2 253 aaKnown RBP13.12□□□□□ -0.31
SMARCE1-205ENST00000431889 VPS13CQ709C8 3753 aa13.12□□□□□ -0.31
SMARCE1-205ENST00000431889 IQANK1A0A1B0GTG1 560 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 LRRC3CA6NJW4 275 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 BCKDKO14874 412 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 PROM1O43490 865 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 SCELO95171 688 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 CLPSP04118 112 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 CT62P0C5K7 136 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 CRABP2P29373 138 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 FBXW4P57775 412 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 IGLV3-21P80748 117 aaPredicted RBP13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 PLIN5Q00G26 463 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 GTF2H2Q13888 395 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 E2F2Q14209 437 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 SETDB1Q15047 1291 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 NNATQ16517 81 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 SGO1Q5FBB7 561 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 C1orf185Q5T7R7 199 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 WLSQ5T9L3 541 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 FAM180BQ6P0A1 224 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 GTF2H2CQ6P1K8 395 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 CYP20A1Q6UW02 462 aa13.11□□□□□ -0.31
SMARCE1-205ENST00000431889 RNF111Q6ZNA4 994 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms